HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.3 nTPM
HPA:55.3 nTPM
GTEx:42.6 nTPM
FANTOM5:64.3 Scaled Tags Per Million
Pig:40.8 nTPM
Mouse:36.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054018
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.3
Sample id Sample description nTPM
Hippocampus
nTPM: 54.2
1911 Female, age 85, right hemisphere 55.5
1898 Male, age 80, left hemisphere 55.4
2148 Female, age 91, left hemisphere 54.2
1855 Male, age 76, left hemisphere 54.0
2529 Female, age 94, left hemisphere 53.8
2621 Female, age 67, right hemisphere 52.0
Dentate gyrus
nTPM: 54.5
2528 Male, age 74, both hemispheres 55.8
1927 Female, age 91, both hemispheres 55.1
2246 Female, age 85, both hemispheres 54.8
2530 Female, age 94, left hemisphere 54.4
2010 Male, age 76, both hemispheres 54.0
2531 Female, age 67, both hemispheres 53.1
Entorhinal gyrus
nTPM: 53.8
1938 Female, age 85, left hemisphere 55.3
2117 Female, age 91, right hemisphere 55.0
2686 Male, age 75, right hemisphere 53.6
2764 Male, age 80, right hemisphere 53.2
1787 Male, age 76, left hemisphere 53.0
2613 Female, age 94, left hemisphere 52.9
Hippocampus, CA1
nTPM: 55.3
1873 Female, age 85, both hemispheres 56.5
2749 Male, age 80, left hemisphere 55.3
2527 Male, age 74, both hemispheres 55.2
2082 Female, age 91, right hemisphere 54.9
2045 Male, age 76, both hemispheres 54.5
Hippocampus, CA2
nTPM: 54.8
2113 Female, age 91, right hemisphere 55.5
2249 Male, age 74, both hemispheres 55.5
1963 Male, age 80, left hemisphere 55.4
1892 Male, age 76, both hemispheres 55.0
1940 Female, age 85, left hemisphere 54.3
2437 Female, age 94, left hemisphere 53.3
Hippocampus, CA3
nTPM: 54.7
1867 Male, age 76, both hemispheres 57.1
1891 Female, age 85, both hemispheres 56.1
2137 Male, age 80, left hemisphere 55.9
2436 Male, age 74, both hemispheres 54.3
2861 Female, age 67, both hemispheres 52.7
2620 Female, age 94, left hemisphere 52.2
Parahippocampal cortex
nTPM: 54.8
2693 Female, age 94, both hemispheres 56.1
2692 Male, age 74, both hemispheres 55.6
1933 Female, age 85, both hemispheres 55.5
1850 Male, age 80, both hemispheres 55.4
2250 Female, age 67, right hemisphere 55.3
2018 Male, age 76, both hemispheres 55.1
1990 Female, age 91, right hemisphere 55.0
2245 Female, age 91, both hemispheres 54.8
2532 Female, age 72, left hemisphere 54.2
2622 Female, age 67, right hemisphere 51.5
Perirhinal gyrus
nTPM: 54.5
1841 Female, age 85, right hemisphere 55.5
2848 Male, age 76, right hemisphere 55.1
2521 Female, age 94, right hemisphere 54.7
1794 Male, age 80, right hemisphere 53.8
1847 Female, age 91, left hemisphere 53.6
Subiculum
nTPM: 54.9
2042 Male, age 76, both hemispheres 56.0
1901 Male, age 80, both hemispheres 55.8
2438 Female, age 94, left hemisphere 55.4
1977 Female, age 85, both hemispheres 55.0
2729 Female, age 91, right hemisphere 54.6
2619 Male, age 74, both hemispheres 52.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.6
Samples: 197

Max nTPM: 81.9
Min nTPM: 20.4
Std nTPM: 11.2
Median nTPM: 40.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 81.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 75.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 73.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 68.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 67.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 65.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 65.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 65.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 65.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 65.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 63.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.3
FF:10153-102I9 76 years, female 69.0
FF:10169-103B7 60 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 42.0
Min nTPM: 39.6
Sample A Female 42.0
Sample B Female 39.8
Sample C Male 41.8
Sample D Male 39.6
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 35.8
Min nTPM: 31.5
Sample A Female 33.9
Sample B Female 35.8
Sample C Male 31.5
Sample D Male 32.5
Subiculum
nTPM: 37.1
Samples: 4

Max nTPM: 39.2
Min nTPM: 35.1
Sample A Female 35.9
Sample B Female 38.2
Sample C Male 35.1
Sample D Male 39.2
Ventral hippocampus
nTPM: 37.5
Samples: 4

Max nTPM: 40.1
Min nTPM: 31.7
Sample A Female 38.7
Sample B Female 40.1
Sample C Male 31.7
Sample D Male 39.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 35.5
Min nTPM: 27.6
Sample A Male 27.6
Sample B Male 34.8
Sample C Female 35.5
Sample D Female 28.9
Hippocampal formation
nTPM: 36.7
Samples: 4

Max nTPM: 38.1
Min nTPM: 35.2
Sample A Male 35.2
Sample B Male 37.5
Sample C Female 38.1
Sample D Female 35.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69549647 Antisense, RP_050310_02_C06, Mouse strain C57BL/6J (56 days, male) 2.0

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