HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:786.7 nTPM
HPA:786.7 nTPM
GTEx:804.2 nTPM
FANTOM5:22.9 Scaled Tags Per Million
Mouse:1313.7 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018504
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 786.7
Sample id Sample description nTPM
Hippocampus
nTPM: 786.7
1898 Male, age 80, left hemisphere 807.7
2529 Female, age 94, left hemisphere 800.5
2621 Female, age 67, right hemisphere 797.3
1855 Male, age 76, left hemisphere 783.4
1911 Female, age 85, right hemisphere 782.9
2148 Female, age 91, left hemisphere 748.4
Dentate gyrus
nTPM: 778.7
2530 Female, age 94, left hemisphere 824.2
2010 Male, age 76, both hemispheres 791.7
2246 Female, age 85, both hemispheres 771.1
1927 Female, age 91, both hemispheres 764.3
2531 Female, age 67, both hemispheres 761.1
2528 Male, age 74, both hemispheres 759.7
Entorhinal gyrus
nTPM: 777.5
2686 Male, age 75, right hemisphere 794.6
1787 Male, age 76, left hemisphere 793.5
1938 Female, age 85, left hemisphere 777.0
2764 Male, age 80, right hemisphere 776.2
2117 Female, age 91, right hemisphere 771.7
2613 Female, age 94, left hemisphere 751.9
Hippocampus, CA1
nTPM: 773.4
2045 Male, age 76, both hemispheres 779.7
1873 Female, age 85, both hemispheres 777.6
2749 Male, age 80, left hemisphere 775.1
2082 Female, age 91, right hemisphere 771.4
2527 Male, age 74, both hemispheres 763.4
Hippocampus, CA2
nTPM: 778.3
2437 Female, age 94, left hemisphere 798.5
1963 Male, age 80, left hemisphere 789.7
1940 Female, age 85, left hemisphere 780.5
1892 Male, age 76, both hemispheres 773.1
2249 Male, age 74, both hemispheres 766.2
2113 Female, age 91, right hemisphere 761.6
Hippocampus, CA3
nTPM: 765.2
1867 Male, age 76, both hemispheres 791.2
2861 Female, age 67, both hemispheres 780.1
1891 Female, age 85, both hemispheres 770.5
2137 Male, age 80, left hemisphere 759.6
2436 Male, age 74, both hemispheres 755.7
2620 Female, age 94, left hemisphere 733.9
Parahippocampal cortex
nTPM: 770.9
2018 Male, age 76, both hemispheres 800.3
1933 Female, age 85, both hemispheres 787.1
1850 Male, age 80, both hemispheres 786.9
2250 Female, age 67, right hemisphere 782.6
1990 Female, age 91, right hemisphere 772.2
2245 Female, age 91, both hemispheres 763.3
2532 Female, age 72, left hemisphere 760.3
2692 Male, age 74, both hemispheres 757.9
2622 Female, age 67, right hemisphere 755.5
2693 Female, age 94, both hemispheres 742.7
Perirhinal gyrus
nTPM: 786.0
1841 Female, age 85, right hemisphere 805.4
1847 Female, age 91, left hemisphere 798.3
1794 Male, age 80, right hemisphere 795.6
2521 Female, age 94, right hemisphere 766.6
2848 Male, age 76, right hemisphere 764.3
Subiculum
nTPM: 775.2
2042 Male, age 76, both hemispheres 800.3
1977 Female, age 85, both hemispheres 781.9
1901 Male, age 80, both hemispheres 777.9
2438 Female, age 94, left hemisphere 766.3
2619 Male, age 74, both hemispheres 763.0
2729 Female, age 91, right hemisphere 761.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 804.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 804.2
Samples: 197

Max nTPM: 2365.1
Min nTPM: 366.5
Std nTPM: 280.6
Median nTPM: 730.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2365.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1773.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1730.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1720.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1652.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1433.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1413.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1319.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1316.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 1315.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1309.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.9
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1313.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1212.3
Samples: 4

Max nTPM: 1280.8
Min nTPM: 1144.4
Sample A Male 1250.1
Sample B Male 1173.9
Sample C Female 1280.8
Sample D Female 1144.4
Hippocampal formation
nTPM: 1313.7
Samples: 4

Max nTPM: 1432.5
Min nTPM: 1185.2
Sample A Male 1432.5
Sample B Male 1185.2
Sample C Female 1311.3
Sample D Female 1325.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
69012777 Antisense, RP_050309_01_E01, Mouse strain C57BL/6J (56 days, male) 13.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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