HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:29.3 nTPM
HPA:29.3 nTPM
GTEx:20.0 nTPM
FANTOM5:6.3 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:17.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060173
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.3
2148 Female, age 91, left hemisphere 32.4
1911 Female, age 85, right hemisphere 30.9
1898 Male, age 80, left hemisphere 29.6
2529 Female, age 94, left hemisphere 29.5
1855 Male, age 76, left hemisphere 27.5
2621 Female, age 67, right hemisphere 25.9
Dentate gyrus
nTPM: 29.2
2010 Male, age 76, both hemispheres 32.1
2528 Male, age 74, both hemispheres 31.4
2530 Female, age 94, left hemisphere 29.1
2246 Female, age 85, both hemispheres 28.5
1927 Female, age 91, both hemispheres 28.1
2531 Female, age 67, both hemispheres 25.8
Entorhinal gyrus
nTPM: 27.6
2117 Female, age 91, right hemisphere 31.9
1787 Male, age 76, left hemisphere 28.9
1938 Female, age 85, left hemisphere 27.7
2764 Male, age 80, right hemisphere 26.6
2686 Male, age 75, right hemisphere 25.9
2613 Female, age 94, left hemisphere 24.4
Hippocampus, CA1
nTPM: 28.4
2527 Male, age 74, both hemispheres 29.8
1873 Female, age 85, both hemispheres 29.1
2082 Female, age 91, right hemisphere 28.8
2045 Male, age 76, both hemispheres 28.5
2749 Male, age 80, left hemisphere 25.9
Hippocampus, CA2
nTPM: 28.7
1940 Female, age 85, left hemisphere 32.3
2249 Male, age 74, both hemispheres 30.8
1963 Male, age 80, left hemisphere 29.6
2113 Female, age 91, right hemisphere 28.2
2437 Female, age 94, left hemisphere 27.0
1892 Male, age 76, both hemispheres 24.1
Hippocampus, CA3
nTPM: 27.7
1891 Female, age 85, both hemispheres 29.1
2620 Female, age 94, left hemisphere 29.0
2436 Male, age 74, both hemispheres 28.9
2861 Female, age 67, both hemispheres 26.8
1867 Male, age 76, both hemispheres 26.6
2137 Male, age 80, left hemisphere 25.9
Parahippocampal cortex
nTPM: 27.1
2018 Male, age 76, both hemispheres 33.0
2692 Male, age 74, both hemispheres 28.8
2245 Female, age 91, both hemispheres 27.5
2532 Female, age 72, left hemisphere 26.8
1990 Female, age 91, right hemisphere 26.6
1850 Male, age 80, both hemispheres 26.4
2250 Female, age 67, right hemisphere 26.3
1933 Female, age 85, both hemispheres 26.0
2622 Female, age 67, right hemisphere 25.3
2693 Female, age 94, both hemispheres 24.7
Perirhinal gyrus
nTPM: 25.7
1847 Female, age 91, left hemisphere 27.4
1794 Male, age 80, right hemisphere 25.5
2521 Female, age 94, right hemisphere 25.5
1841 Female, age 85, right hemisphere 25.1
2848 Male, age 76, right hemisphere 24.9
Subiculum
nTPM: 28.9
2042 Male, age 76, both hemispheres 31.5
2729 Female, age 91, right hemisphere 30.5
1901 Male, age 80, both hemispheres 29.2
2619 Male, age 74, both hemispheres 28.6
1977 Female, age 85, both hemispheres 27.2
2438 Female, age 94, left hemisphere 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 204.0
Min nTPM: 3.5
Std nTPM: 21.7
Median nTPM: 15.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 204.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 196.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 87.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 75.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 57.6
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 50.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 47.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 42.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.3
FF:10153-102I9 76 years, female 6.3
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.7
Samples: 4

Max nTPM: 5.5
Min nTPM: 1.5
Sample A Female 1.6
Sample B Female 2.0
Sample C Male 5.5
Sample D Male 1.5
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 3.4
Sample C Male 4.3
Sample D Male 3.6
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.3
Sample A Female 4.5
Sample B Female 3.9
Sample C Male 5.9
Sample D Male 3.3
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 5.4
Min nTPM: 1.5
Sample A Female 1.5
Sample B Female 2.9
Sample C Male 5.4
Sample D Male 2.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 15.5
Min nTPM: 7.9
Sample A Male 10.0
Sample B Male 7.9
Sample C Female 14.4
Sample D Female 15.5
Hippocampal formation
nTPM: 17.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 14.4
Sample A Male 18.1
Sample B Male 17.5
Sample C Female 21.2
Sample D Female 14.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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