HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.5 nTPM
HPA:57.5 nTPM
GTEx:45.9 nTPM
FANTOM5:55.8 Scaled Tags Per Million
Mouse:94.0 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064535Antibody CAB008909
Glial cells Not detectedMedium
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.5
Sample id Sample description nTPM
Hippocampus
nTPM: 50.2
1898 Male, age 80, left hemisphere 56.7
1855 Male, age 76, left hemisphere 54.6
2621 Female, age 67, right hemisphere 53.5
2148 Female, age 91, left hemisphere 47.2
1911 Female, age 85, right hemisphere 45.0
2529 Female, age 94, left hemisphere 44.3
Dentate gyrus
nTPM: 53.4
1927 Female, age 91, both hemispheres 60.0
2530 Female, age 94, left hemisphere 59.5
2010 Male, age 76, both hemispheres 54.7
2246 Female, age 85, both hemispheres 49.8
2528 Male, age 74, both hemispheres 48.3
2531 Female, age 67, both hemispheres 47.9
Entorhinal gyrus
nTPM: 50.0
2613 Female, age 94, left hemisphere 56.0
2764 Male, age 80, right hemisphere 54.6
1787 Male, age 76, left hemisphere 52.9
1938 Female, age 85, left hemisphere 50.7
2686 Male, age 75, right hemisphere 43.6
2117 Female, age 91, right hemisphere 42.0
Hippocampus, CA1
nTPM: 54.8
2749 Male, age 80, left hemisphere 74.9
1873 Female, age 85, both hemispheres 55.0
2045 Male, age 76, both hemispheres 49.2
2527 Male, age 74, both hemispheres 49.2
2082 Female, age 91, right hemisphere 45.9
Hippocampus, CA2
nTPM: 52.2
1892 Male, age 76, both hemispheres 61.4
1963 Male, age 80, left hemisphere 59.6
2437 Female, age 94, left hemisphere 55.4
2249 Male, age 74, both hemispheres 47.0
1940 Female, age 85, left hemisphere 46.2
2113 Female, age 91, right hemisphere 43.6
Hippocampus, CA3
nTPM: 51.2
2137 Male, age 80, left hemisphere 59.9
2620 Female, age 94, left hemisphere 53.0
1867 Male, age 76, both hemispheres 52.6
2436 Male, age 74, both hemispheres 48.4
2861 Female, age 67, both hemispheres 47.6
1891 Female, age 85, both hemispheres 45.9
Parahippocampal cortex
nTPM: 49.1
1850 Male, age 80, both hemispheres 53.6
2245 Female, age 91, both hemispheres 52.0
1933 Female, age 85, both hemispheres 51.0
2693 Female, age 94, both hemispheres 51.0
1990 Female, age 91, right hemisphere 50.9
2250 Female, age 67, right hemisphere 50.6
2532 Female, age 72, left hemisphere 47.5
2018 Male, age 76, both hemispheres 45.9
2622 Female, age 67, right hemisphere 44.7
2692 Male, age 74, both hemispheres 43.8
Perirhinal gyrus
nTPM: 57.5
1847 Female, age 91, left hemisphere 68.6
1794 Male, age 80, right hemisphere 59.0
2521 Female, age 94, right hemisphere 56.0
1841 Female, age 85, right hemisphere 54.3
2848 Male, age 76, right hemisphere 49.4
Subiculum
nTPM: 48.3
2438 Female, age 94, left hemisphere 53.1
1901 Male, age 80, both hemispheres 52.1
1977 Female, age 85, both hemispheres 51.5
2619 Male, age 74, both hemispheres 47.4
2042 Male, age 76, both hemispheres 44.2
2729 Female, age 91, right hemisphere 41.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.9
Samples: 197

Max nTPM: 117.8
Min nTPM: 5.2
Std nTPM: 24.1
Median nTPM: 43.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 117.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 115.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 108.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 106.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 101.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 96.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 95.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 91.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 91.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 90.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 89.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.8
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 37.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 92.1
Samples: 4

Max nTPM: 99.4
Min nTPM: 83.3
Sample A Male 88.1
Sample B Male 99.4
Sample C Female 97.5
Sample D Female 83.3
Hippocampal formation
nTPM: 94.0
Samples: 4

Max nTPM: 105.4
Min nTPM: 84.6
Sample A Male 105.4
Sample B Male 84.6
Sample C Female 89.0
Sample D Female 96.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
245 Antisense, RP_Baylor_102682, Mouse strain C57BL/6J (56 days, male) 17.4
244 Antisense, RP_Baylor_102682, Mouse strain C57BL/6J (56 days, male) 6.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.