AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.5 nTPM
HPA:35.5 nTPM
GTEx:39.4 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:51.8 nTPM
Allen mouse:10.7 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 35.5
Sample id Sample description nTPM
Amygdala
nTPM: 34.3
2814 Male, age 76, right hemisphere 35.2
2695 Female, age 67, right hemisphere 34.5
2514 Male, age 75, right hemisphere 34.2
2517 Female, age 94, left hemisphere 34.0
1987 Female, age 91, left hemisphere 33.4
Basal amygdala
nTPM: 35.1
2609 Male, age 75, right hemisphere 36.4
2685 Female, age 94, left hemisphere 36.1
1955 Male, age 76, both hemispheres 35.0
2243 Female, age 91, right hemisphere 35.0
2827 Female, age 67, right hemisphere 34.3
2110 Male, age 80, left hemisphere 33.8
Central amygdala
nTPM: 35.5
2826 Female, age 94, left hemisphere 41.0
2515 Male, age 75, right hemisphere 35.3
1905 Male, age 76, both hemispheres 35.2
2239 Male, age 80, left hemisphere 34.0
2701 Female, age 91, right hemisphere 32.1
Corticomedial amygdala
nTPM: 33.0
2428 Male, age 75, right hemisphere 34.6
2829 Male, age 80, left hemisphere 34.3
2242 Female, age 91, right hemisphere 33.9
2429 Female, age 94, left hemisphere 32.2
2535 Female, age 67, right hemisphere 32.1
2240 Male, age 76, both hemispheres 31.1
Lateral amygdala
nTPM: 35.1
2534 Female, age 94, left hemisphere 39.7
1883 Male, age 76, both hemispheres 35.3
2516 Male, age 75, right hemisphere 34.7
2830 Female, age 67, right hemisphere 34.7
2256 Male, age 80, left hemisphere 33.8
2255 Female, age 91, right hemisphere 32.6
Stria terminalis, bed nucleus
nTPM: 32.1
1974 Female, age 91, both hemispheres 33.0
2486 Female, age 94, both hemispheres 32.2
2201 Male, age 74, unknown 31.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 39.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 39.4
Samples: 152

Max nTPM: 80.1
Min nTPM: 9.9
Std nTPM: 12.1
Median nTPM: 38.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 80.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 75.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 75.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 71.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 70.4
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 67.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 65.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 65.3
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 61.5
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 59.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 56.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 32.1
FF:10151-102I7 76 years, female 32.1

AMYGDALA - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Amygdala
nTPM: 14.6
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.7
Sample A Female 16.2
Sample B Female 13.8
Sample C Male 15.8
Sample D Male 12.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 51.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 51.8
Samples: 4

Max nTPM: 56.3
Min nTPM: 48.1
Sample A Male 48.1
Sample B Male 53.1
Sample C Female 56.3
Sample D Female 49.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.7
71610819 Antisense, RP_050927_01_H07, Mouse strain C57BL/6J (56 days, male) 10.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.