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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:246.9 nTPM
FANTOM5:266.3 Scaled Tags Per Million
Pig:89.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027132
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 246.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 246.9
Samples: 246

Max nTPM: 590.2
Min nTPM: 61.8
Std nTPM: 97.3
Median nTPM: 220.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 590.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 516.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 512.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 502.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 488.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 488.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 471.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 470.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 463.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 457.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 457.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 450.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 449.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 442.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 440.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 431.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 429.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 426.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 418.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 413.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 410.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 403.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 396.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 387.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 382.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 377.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 368.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 364.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 362.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 360.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 359.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 358.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 357.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 356.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 354.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 354.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 353.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 351.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 349.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 348.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 347.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 338.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 336.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 335.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 334.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 331.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 330.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 329.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 327.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 327.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 325.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 324.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 323.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 322.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 321.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 321.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 321.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 321.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 319.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 317.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 309.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 307.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 306.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 304.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 304.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 302.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 301.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 296.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 295.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 293.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 292.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 292.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 290.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 290.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 290.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 286.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 281.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 280.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 279.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 277.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 275.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 275.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 275.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 273.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 273.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 273.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 270.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 267.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 266.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 265.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 264.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 261.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 259.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 257.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 256.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 256.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 252.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 249.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 248.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 247.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 244.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 244.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 242.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 241.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 239.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 239.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 239.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 237.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 236.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 234.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 232.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 228.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 227.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 225.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 225.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 225.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 224.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 224.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 223.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 223.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 222.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 222.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 221.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 219.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 219.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 217.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 217.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 217.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 212.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 211.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 211.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 211.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 210.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 210.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 210.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 208.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 207.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 206.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 206.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 206.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 205.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 204.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 204.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 203.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 203.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 203.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 202.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 202.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 202.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 201.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 200.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 198.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 197.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 197.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 197.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 196.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 196.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 196.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 195.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 193.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 192.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 192.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 191.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 191.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 190.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 188.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 188.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 187.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 187.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 187.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 186.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 186.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 186.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 185.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 185.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 185.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 183.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 183.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 182.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 181.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 180.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 179.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 177.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 176.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 174.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 174.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 173.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 173.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 172.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 171.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 170.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 169.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 169.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 167.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 167.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 166.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 166.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 165.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 164.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 163.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 163.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 163.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 161.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 160.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 160.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 158.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 157.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 156.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 153.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 152.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 152.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 151.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 151.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 149.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 149.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 148.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 147.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 145.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 144.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 143.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 142.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 140.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 140.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 140.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 139.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 139.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 137.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 136.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 136.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 122.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 119.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 119.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 116.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 115.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 113.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 107.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 107.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 101.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 99.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 90.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 64.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 61.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 266.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 266.3
FF:10164-103B2 76 years, female 266.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 89.2
Pig sample Sample description nTPM
Caudate
nTPM: 89.2
Samples: 4

Max nTPM: 102.1
Min nTPM: 71.9
Sample A Female 71.9
Sample B Female 102.1
Sample C Male 96.4
Sample D Male 86.4

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