HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:11.2 nTPM
FANTOM5:26.8 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:24.9 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044504
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1898 Male, age 80, left hemisphere 11.7
2529 Female, age 94, left hemisphere 10.7
2621 Female, age 67, right hemisphere 10.4
1911 Female, age 85, right hemisphere 10.0
2148 Female, age 91, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.4
Dentate gyrus
nTPM: 9.9
1927 Female, age 91, both hemispheres 10.5
2010 Male, age 76, both hemispheres 10.5
2246 Female, age 85, both hemispheres 9.8
2528 Male, age 74, both hemispheres 9.6
2530 Female, age 94, left hemisphere 9.5
2531 Female, age 67, both hemispheres 9.2
Entorhinal gyrus
nTPM: 9.5
1938 Female, age 85, left hemisphere 10.2
2117 Female, age 91, right hemisphere 10.2
1787 Male, age 76, left hemisphere 9.3
2764 Male, age 80, right hemisphere 9.3
2686 Male, age 75, right hemisphere 9.2
2613 Female, age 94, left hemisphere 8.9
Hippocampus, CA1
nTPM: 10.9
2749 Male, age 80, left hemisphere 13.1
2527 Male, age 74, both hemispheres 11.7
2045 Male, age 76, both hemispheres 10.5
1873 Female, age 85, both hemispheres 10.2
2082 Female, age 91, right hemisphere 9.2
Hippocampus, CA2
nTPM: 10.2
1892 Male, age 76, both hemispheres 11.2
1963 Male, age 80, left hemisphere 10.7
2249 Male, age 74, both hemispheres 10.7
1940 Female, age 85, left hemisphere 9.8
2113 Female, age 91, right hemisphere 9.8
2437 Female, age 94, left hemisphere 9.0
Hippocampus, CA3
nTPM: 10.5
2137 Male, age 80, left hemisphere 12.0
1867 Male, age 76, both hemispheres 11.9
2436 Male, age 74, both hemispheres 11.0
1891 Female, age 85, both hemispheres 10.6
2620 Female, age 94, left hemisphere 9.0
2861 Female, age 67, both hemispheres 8.8
Parahippocampal cortex
nTPM: 9.7
1850 Male, age 80, both hemispheres 11.0
1933 Female, age 85, both hemispheres 10.4
2532 Female, age 72, left hemisphere 10.1
2250 Female, age 67, right hemisphere 9.9
2018 Male, age 76, both hemispheres 9.8
2245 Female, age 91, both hemispheres 9.6
1990 Female, age 91, right hemisphere 9.5
2693 Female, age 94, both hemispheres 8.9
2622 Female, age 67, right hemisphere 8.7
2692 Male, age 74, both hemispheres 8.7
Perirhinal gyrus
nTPM: 10.0
1841 Female, age 85, right hemisphere 10.3
1847 Female, age 91, left hemisphere 10.2
1794 Male, age 80, right hemisphere 10.0
2521 Female, age 94, right hemisphere 9.9
2848 Male, age 76, right hemisphere 9.4
Subiculum
nTPM: 10.2
2438 Female, age 94, left hemisphere 12.3
1901 Male, age 80, both hemispheres 10.5
2042 Male, age 76, both hemispheres 10.5
1977 Female, age 85, both hemispheres 9.7
2619 Male, age 74, both hemispheres 9.5
2729 Female, age 91, right hemisphere 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 24.9
Min nTPM: 4.5
Std nTPM: 2.1
Median nTPM: 11.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 24.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 17.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 16.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 15.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 15.2
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 15.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 14.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 14.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 14.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.8
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 23.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 21.4
Min nTPM: 15.0
Sample A Female 21.4
Sample B Female 18.5
Sample C Male 17.1
Sample D Male 15.0
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 18.2
Min nTPM: 12.0
Sample A Female 15.9
Sample B Female 18.2
Sample C Male 14.3
Sample D Male 12.0
Subiculum
nTPM: 15.4
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.5
Sample A Female 17.8
Sample B Female 14.6
Sample C Male 13.5
Sample D Male 15.5
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 17.8
Min nTPM: 14.4
Sample A Female 17.8
Sample B Female 14.4
Sample C Male 14.4
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 25.1
Min nTPM: 21.4
Sample A Male 23.1
Sample B Male 24.9
Sample C Female 25.1
Sample D Female 21.4
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 28.5
Min nTPM: 22.0
Sample A Male 28.5
Sample B Male 25.3
Sample C Female 23.9
Sample D Female 22.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
69028641 Antisense, RP_050316_01_G01, Mouse strain C57BL/6J (56 days, male) 4.3

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