HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.5 nTPM
HPA:44.5 nTPM
GTEx:63.3 nTPM
FANTOM5:98.2 Scaled Tags Per Million
Pig:29.9 nTPM
Mouse:181.4 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044001
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.5
Sample id Sample description nTPM
Hippocampus
nTPM: 42.6
1898 Male, age 80, left hemisphere 48.1
1855 Male, age 76, left hemisphere 42.3
2148 Female, age 91, left hemisphere 41.7
2529 Female, age 94, left hemisphere 41.6
1911 Female, age 85, right hemisphere 40.9
2621 Female, age 67, right hemisphere 40.7
Dentate gyrus
nTPM: 42.4
2010 Male, age 76, both hemispheres 44.8
1927 Female, age 91, both hemispheres 43.1
2528 Male, age 74, both hemispheres 43.1
2530 Female, age 94, left hemisphere 42.0
2246 Female, age 85, both hemispheres 41.0
2531 Female, age 67, both hemispheres 40.3
Entorhinal gyrus
nTPM: 41.7
1938 Female, age 85, left hemisphere 43.6
2764 Male, age 80, right hemisphere 43.1
2117 Female, age 91, right hemisphere 42.1
1787 Male, age 76, left hemisphere 41.3
2686 Male, age 75, right hemisphere 40.3
2613 Female, age 94, left hemisphere 40.0
Hippocampus, CA1
nTPM: 44.5
2749 Male, age 80, left hemisphere 48.6
2527 Male, age 74, both hemispheres 45.6
1873 Female, age 85, both hemispheres 44.5
2045 Male, age 76, both hemispheres 42.9
2082 Female, age 91, right hemisphere 41.0
Hippocampus, CA2
nTPM: 43.7
1892 Male, age 76, both hemispheres 46.5
1963 Male, age 80, left hemisphere 45.7
2249 Male, age 74, both hemispheres 45.0
1940 Female, age 85, left hemisphere 42.0
2437 Female, age 94, left hemisphere 41.5
2113 Female, age 91, right hemisphere 41.3
Hippocampus, CA3
nTPM: 42.9
2436 Male, age 74, both hemispheres 45.8
1867 Male, age 76, both hemispheres 45.5
2137 Male, age 80, left hemisphere 44.5
1891 Female, age 85, both hemispheres 41.6
2620 Female, age 94, left hemisphere 41.0
2861 Female, age 67, both hemispheres 39.1
Parahippocampal cortex
nTPM: 41.4
1933 Female, age 85, both hemispheres 44.0
1850 Male, age 80, both hemispheres 43.2
1990 Female, age 91, right hemisphere 42.9
2250 Female, age 67, right hemisphere 42.5
2018 Male, age 76, both hemispheres 42.1
2245 Female, age 91, both hemispheres 41.9
2693 Female, age 94, both hemispheres 40.7
2692 Male, age 74, both hemispheres 40.1
2532 Female, age 72, left hemisphere 39.8
2622 Female, age 67, right hemisphere 37.3
Perirhinal gyrus
nTPM: 43.6
1841 Female, age 85, right hemisphere 45.5
1847 Female, age 91, left hemisphere 45.5
1794 Male, age 80, right hemisphere 43.7
2521 Female, age 94, right hemisphere 42.2
2848 Male, age 76, right hemisphere 41.2
Subiculum
nTPM: 41.3
1901 Male, age 80, both hemispheres 43.5
1977 Female, age 85, both hemispheres 42.8
2042 Male, age 76, both hemispheres 40.9
2729 Female, age 91, right hemisphere 40.7
2619 Male, age 74, both hemispheres 40.4
2438 Female, age 94, left hemisphere 39.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.3
Samples: 197

Max nTPM: 206.8
Min nTPM: 30.1
Std nTPM: 19.4
Median nTPM: 60.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 206.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 105.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 103.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 103.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 101.9
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 100.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 99.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 99.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 98.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 97.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.2
FF:10169-103B7 60 years, female 139.1
FF:10153-102I9 76 years, female 57.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 35.4
Min nTPM: 26.9
Sample A Female 35.4
Sample B Female 29.2
Sample C Male 28.0
Sample D Male 26.9
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 39.1
Min nTPM: 20.8
Sample A Female 28.8
Sample B Female 39.1
Sample C Male 22.3
Sample D Male 20.8
Subiculum
nTPM: 28.6
Samples: 4

Max nTPM: 34.3
Min nTPM: 24.7
Sample A Female 34.3
Sample B Female 24.7
Sample C Male 27.5
Sample D Male 28.0
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 34.6
Min nTPM: 22.9
Sample A Female 34.6
Sample B Female 22.9
Sample C Male 28.8
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 181.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 171.4
Samples: 4

Max nTPM: 185.2
Min nTPM: 154.5
Sample A Male 154.5
Sample B Male 185.2
Sample C Female 180.6
Sample D Female 165.1
Hippocampal formation
nTPM: 181.4
Samples: 4

Max nTPM: 216.5
Min nTPM: 153.6
Sample A Male 216.5
Sample B Male 166.1
Sample C Female 153.6
Sample D Female 189.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
70295894 Antisense, RP_050531_04_C01, Mouse strain C57BL/6J (56 days, male) 1.0

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