HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.5 nTPM
HPA:10.5 nTPM
GTEx:9.3 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:11.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046861Antibody HPA048914
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 7.9
1898 Male, age 80, left hemisphere 9.6
1855 Male, age 76, left hemisphere 7.8
2148 Female, age 91, left hemisphere 7.8
2621 Female, age 67, right hemisphere 7.5
2529 Female, age 94, left hemisphere 7.3
1911 Female, age 85, right hemisphere 7.2
Dentate gyrus
nTPM: 9.1
1927 Female, age 91, both hemispheres 10.5
2531 Female, age 67, both hemispheres 9.4
2010 Male, age 76, both hemispheres 8.9
2246 Female, age 85, both hemispheres 8.9
2528 Male, age 74, both hemispheres 8.6
2530 Female, age 94, left hemisphere 8.4
Entorhinal gyrus
nTPM: 9.1
1938 Female, age 85, left hemisphere 11.2
1787 Male, age 76, left hemisphere 10.4
2764 Male, age 80, right hemisphere 9.7
2613 Female, age 94, left hemisphere 9.5
2117 Female, age 91, right hemisphere 7.4
2686 Male, age 75, right hemisphere 6.4
Hippocampus, CA1
nTPM: 9.3
2749 Male, age 80, left hemisphere 11.2
2045 Male, age 76, both hemispheres 10.0
1873 Female, age 85, both hemispheres 9.9
2527 Male, age 74, both hemispheres 8.4
2082 Female, age 91, right hemisphere 7.0
Hippocampus, CA2
nTPM: 8.4
1892 Male, age 76, both hemispheres 11.4
1963 Male, age 80, left hemisphere 9.2
2249 Male, age 74, both hemispheres 8.2
2437 Female, age 94, left hemisphere 8.1
2113 Female, age 91, right hemisphere 6.8
1940 Female, age 85, left hemisphere 6.6
Hippocampus, CA3
nTPM: 8.5
2620 Female, age 94, left hemisphere 10.0
1867 Male, age 76, both hemispheres 8.9
2137 Male, age 80, left hemisphere 8.4
1891 Female, age 85, both hemispheres 8.2
2861 Female, age 67, both hemispheres 8.2
2436 Male, age 74, both hemispheres 7.6
Parahippocampal cortex
nTPM: 8.3
1933 Female, age 85, both hemispheres 10.3
1850 Male, age 80, both hemispheres 10.0
2250 Female, age 67, right hemisphere 9.6
1990 Female, age 91, right hemisphere 9.4
2245 Female, age 91, both hemispheres 8.3
2693 Female, age 94, both hemispheres 8.3
2532 Female, age 72, left hemisphere 7.5
2692 Male, age 74, both hemispheres 7.0
2018 Male, age 76, both hemispheres 6.9
2622 Female, age 67, right hemisphere 6.1
Perirhinal gyrus
nTPM: 10.5
1847 Female, age 91, left hemisphere 12.1
2848 Male, age 76, right hemisphere 10.5
1794 Male, age 80, right hemisphere 10.3
1841 Female, age 85, right hemisphere 10.2
2521 Female, age 94, right hemisphere 9.4
Subiculum
nTPM: 7.5
1977 Female, age 85, both hemispheres 10.5
1901 Male, age 80, both hemispheres 7.6
2438 Female, age 94, left hemisphere 7.5
2729 Female, age 91, right hemisphere 6.9
2619 Male, age 74, both hemispheres 6.5
2042 Male, age 76, both hemispheres 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.3
Samples: 197

Max nTPM: 22.7
Min nTPM: 3.0
Std nTPM: 2.8
Median nTPM: 9.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 22.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 19.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 16.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 15.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 15.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 14.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 14.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 14.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 20.3
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.9
Sample A Female 10.6
Sample B Female 10.1
Sample C Male 9.4
Sample D Male 6.9
Entorhinal cortex
nTPM: 9.5
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.3
Sample A Female 9.3
Sample B Female 9.2
Sample C Male 11.3
Sample D Male 8.3
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 13.3
Min nTPM: 8.3
Sample A Female 13.3
Sample B Female 10.8
Sample C Male 12.5
Sample D Male 8.3
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 14.1
Min nTPM: 7.6
Sample A Female 10.0
Sample B Female 9.2
Sample C Male 14.1
Sample D Male 7.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.