HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.4 nTPM
HPA:23.4 nTPM
GTEx:18.7 nTPM
FANTOM5:42.6 Scaled Tags Per Million
Pig:10.4 nTPM
Mouse:18.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019827
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
2148 Female, age 91, left hemisphere 24.3
1911 Female, age 85, right hemisphere 23.5
1855 Male, age 76, left hemisphere 23.3
1898 Male, age 80, left hemisphere 23.0
2621 Female, age 67, right hemisphere 22.2
2529 Female, age 94, left hemisphere 21.4
Dentate gyrus
nTPM: 23.0
2528 Male, age 74, both hemispheres 24.5
1927 Female, age 91, both hemispheres 23.4
2531 Female, age 67, both hemispheres 23.0
2246 Female, age 85, both hemispheres 22.9
2010 Male, age 76, both hemispheres 22.7
2530 Female, age 94, left hemisphere 21.5
Entorhinal gyrus
nTPM: 21.5
2117 Female, age 91, right hemisphere 24.4
2613 Female, age 94, left hemisphere 21.4
1938 Female, age 85, left hemisphere 21.1
2686 Male, age 75, right hemisphere 21.0
2764 Male, age 80, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.5
Hippocampus, CA1
nTPM: 22.9
2082 Female, age 91, right hemisphere 24.1
1873 Female, age 85, both hemispheres 23.9
2527 Male, age 74, both hemispheres 22.7
2749 Male, age 80, left hemisphere 22.0
2045 Male, age 76, both hemispheres 21.6
Hippocampus, CA2
nTPM: 23.1
2249 Male, age 74, both hemispheres 24.0
1940 Female, age 85, left hemisphere 23.6
2113 Female, age 91, right hemisphere 23.3
1892 Male, age 76, both hemispheres 23.1
1963 Male, age 80, left hemisphere 23.1
2437 Female, age 94, left hemisphere 21.7
Hippocampus, CA3
nTPM: 22.8
2620 Female, age 94, left hemisphere 25.2
1891 Female, age 85, both hemispheres 24.7
2436 Male, age 74, both hemispheres 23.5
2861 Female, age 67, both hemispheres 21.4
1867 Male, age 76, both hemispheres 21.2
2137 Male, age 80, left hemisphere 20.9
Parahippocampal cortex
nTPM: 22.1
1933 Female, age 85, both hemispheres 23.3
2692 Male, age 74, both hemispheres 23.2
2532 Female, age 72, left hemisphere 23.1
1850 Male, age 80, both hemispheres 22.7
2693 Female, age 94, both hemispheres 22.3
1990 Female, age 91, right hemisphere 21.7
2622 Female, age 67, right hemisphere 21.7
2245 Female, age 91, both hemispheres 21.0
2018 Male, age 76, both hemispheres 20.9
2250 Female, age 67, right hemisphere 20.9
Perirhinal gyrus
nTPM: 21.4
1841 Female, age 85, right hemisphere 23.1
2521 Female, age 94, right hemisphere 21.4
2848 Male, age 76, right hemisphere 21.2
1847 Female, age 91, left hemisphere 20.8
1794 Male, age 80, right hemisphere 20.5
Subiculum
nTPM: 23.4
2729 Female, age 91, right hemisphere 25.1
2619 Male, age 74, both hemispheres 24.9
2438 Female, age 94, left hemisphere 23.4
1977 Female, age 85, both hemispheres 23.0
1901 Male, age 80, both hemispheres 22.0
2042 Male, age 76, both hemispheres 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.7
Samples: 197

Max nTPM: 34.9
Min nTPM: 8.9
Std nTPM: 4.4
Median nTPM: 18.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 34.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 28.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 28.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 28.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 28.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 27.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 27.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 26.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.6
FF:10153-102I9 76 years, female 50.7
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.9
Sample A Female 10.4
Sample B Female 10.2
Sample C Male 8.9
Sample D Male 10.3
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.9
Sample A Female 9.0
Sample B Female 9.7
Sample C Male 9.1
Sample D Male 8.9
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.7
Sample A Female 10.2
Sample B Female 8.6
Sample C Male 9.2
Sample D Male 7.7
Ventral hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.1
Sample A Female 10.8
Sample B Female 9.1
Sample C Male 11.1
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 13.9
Sample A Male 13.9
Sample B Male 19.2
Sample C Female 18.9
Sample D Female 18.3
Hippocampal formation
nTPM: 18.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 17.5
Sample A Male 19.4
Sample B Male 17.5
Sample C Female 17.7
Sample D Female 19.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
74990483 Antisense, RP_060410_01_A06, Mouse strain C57BL/6J (56 days, male) 1.7
112643861 Antisense, RP_110421_01_B05, Mouse strain C57BL/6J (56 days, male) 1.5
68191330 Antisense, RP_041129_01_A03, Mouse strain C57BL/6J (56 days, male) 0.4
70812853 Antisense, RP_050712_02_G04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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