HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:20.4 nTPM
FANTOM5:66.6 Scaled Tags Per Million
Pig:41.6 nTPM
Mouse:23.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038182
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
1898 Male, age 80, left hemisphere 18.8
1855 Male, age 76, left hemisphere 16.5
2621 Female, age 67, right hemisphere 15.6
2529 Female, age 94, left hemisphere 15.3
2148 Female, age 91, left hemisphere 15.0
1911 Female, age 85, right hemisphere 14.9
Dentate gyrus
nTPM: 15.3
2010 Male, age 76, both hemispheres 17.8
1927 Female, age 91, both hemispheres 17.3
2246 Female, age 85, both hemispheres 16.0
2531 Female, age 67, both hemispheres 14.2
2530 Female, age 94, left hemisphere 13.8
2528 Male, age 74, both hemispheres 13.0
Entorhinal gyrus
nTPM: 14.7
1938 Female, age 85, left hemisphere 18.2
2764 Male, age 80, right hemisphere 15.2
1787 Male, age 76, left hemisphere 14.5
2117 Female, age 91, right hemisphere 13.9
2613 Female, age 94, left hemisphere 13.5
2686 Male, age 75, right hemisphere 13.1
Hippocampus, CA1
nTPM: 16.6
1873 Female, age 85, both hemispheres 19.0
2749 Male, age 80, left hemisphere 18.8
2045 Male, age 76, both hemispheres 16.4
2527 Male, age 74, both hemispheres 15.1
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 15.5
1892 Male, age 76, both hemispheres 20.2
1963 Male, age 80, left hemisphere 17.0
2113 Female, age 91, right hemisphere 14.1
1940 Female, age 85, left hemisphere 13.9
2249 Male, age 74, both hemispheres 13.9
2437 Female, age 94, left hemisphere 13.6
Hippocampus, CA3
nTPM: 15.5
2137 Male, age 80, left hemisphere 20.9
1867 Male, age 76, both hemispheres 17.3
1891 Female, age 85, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.6
2620 Female, age 94, left hemisphere 13.8
2861 Female, age 67, both hemispheres 11.7
Parahippocampal cortex
nTPM: 15.4
1850 Male, age 80, both hemispheres 17.8
2018 Male, age 76, both hemispheres 16.6
1933 Female, age 85, both hemispheres 16.4
1990 Female, age 91, right hemisphere 16.4
2245 Female, age 91, both hemispheres 15.9
2250 Female, age 67, right hemisphere 15.2
2693 Female, age 94, both hemispheres 15.0
2622 Female, age 67, right hemisphere 14.4
2532 Female, age 72, left hemisphere 14.2
2692 Male, age 74, both hemispheres 12.3
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 18.2
1794 Male, age 80, right hemisphere 18.0
1841 Female, age 85, right hemisphere 17.4
2848 Male, age 76, right hemisphere 16.2
2521 Female, age 94, right hemisphere 15.5
Subiculum
nTPM: 15.1
1901 Male, age 80, both hemispheres 16.8
1977 Female, age 85, both hemispheres 15.5
2042 Male, age 76, both hemispheres 15.4
2438 Female, age 94, left hemisphere 15.1
2619 Male, age 74, both hemispheres 14.2
2729 Female, age 91, right hemisphere 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 44.5
Min nTPM: 6.8
Std nTPM: 5.4
Median nTPM: 19.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 44.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 41.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 34.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 31.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 30.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 29.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 29.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.6
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 56.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.9
Samples: 4

Max nTPM: 43.9
Min nTPM: 37.0
Sample A Female 43.9
Sample B Female 37.0
Sample C Male 37.7
Sample D Male 41.0
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 53.3
Min nTPM: 34.4
Sample A Female 38.8
Sample B Female 53.3
Sample C Male 39.8
Sample D Male 34.4
Subiculum
nTPM: 37.5
Samples: 4

Max nTPM: 46.8
Min nTPM: 31.9
Sample A Female 46.8
Sample B Female 34.6
Sample C Male 31.9
Sample D Male 36.7
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 33.9
Min nTPM: 29.7
Sample A Female 33.9
Sample B Female 31.6
Sample C Male 29.7
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 19.5
Sample A Male 20.5
Sample B Male 22.6
Sample C Female 23.2
Sample D Female 19.5
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.3
Sample A Male 23.9
Sample B Male 22.3
Sample C Female 25.8
Sample D Female 20.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70523780 Antisense, RP_050301_02_G09, Mouse strain C57BL/6J (56 days, male) 0.3

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