HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.1 nTPM
HPA:20.1 nTPM
GTEx:28.2 nTPM
FANTOM5:9.3 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:64.0 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.1
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
2148 Female, age 91, left hemisphere 20.8
2621 Female, age 67, right hemisphere 20.1
1898 Male, age 80, left hemisphere 20.0
2529 Female, age 94, left hemisphere 19.6
1855 Male, age 76, left hemisphere 18.0
1911 Female, age 85, right hemisphere 16.4
Dentate gyrus
nTPM: 19.0
2531 Female, age 67, both hemispheres 20.4
1927 Female, age 91, both hemispheres 19.8
2010 Male, age 76, both hemispheres 19.1
2530 Female, age 94, left hemisphere 19.1
2528 Male, age 74, both hemispheres 18.9
2246 Female, age 85, both hemispheres 16.8
Entorhinal gyrus
nTPM: 19.8
2764 Male, age 80, right hemisphere 22.0
1787 Male, age 76, left hemisphere 20.9
2613 Female, age 94, left hemisphere 20.6
2686 Male, age 75, right hemisphere 19.8
1938 Female, age 85, left hemisphere 18.5
2117 Female, age 91, right hemisphere 17.2
Hippocampus, CA1
nTPM: 18.6
2749 Male, age 80, left hemisphere 22.0
2082 Female, age 91, right hemisphere 18.3
2527 Male, age 74, both hemispheres 18.1
1873 Female, age 85, both hemispheres 17.3
2045 Male, age 76, both hemispheres 17.3
Hippocampus, CA2
nTPM: 18.4
1892 Male, age 76, both hemispheres 21.4
2437 Female, age 94, left hemisphere 19.5
1963 Male, age 80, left hemisphere 19.1
2249 Male, age 74, both hemispheres 17.1
2113 Female, age 91, right hemisphere 17.0
1940 Female, age 85, left hemisphere 15.9
Hippocampus, CA3
nTPM: 20.1
2861 Female, age 67, both hemispheres 24.2
2620 Female, age 94, left hemisphere 22.9
1867 Male, age 76, both hemispheres 20.1
2137 Male, age 80, left hemisphere 19.2
2436 Male, age 74, both hemispheres 18.1
1891 Female, age 85, both hemispheres 16.3
Parahippocampal cortex
nTPM: 19.3
2622 Female, age 67, right hemisphere 23.0
1990 Female, age 91, right hemisphere 20.1
2250 Female, age 67, right hemisphere 19.5
2245 Female, age 91, both hemispheres 19.2
2692 Male, age 74, both hemispheres 19.0
1933 Female, age 85, both hemispheres 18.5
2693 Female, age 94, both hemispheres 18.5
2532 Female, age 72, left hemisphere 18.3
1850 Male, age 80, both hemispheres 18.2
2018 Male, age 76, both hemispheres 18.2
Perirhinal gyrus
nTPM: 18.9
1794 Male, age 80, right hemisphere 20.7
1847 Female, age 91, left hemisphere 20.5
2521 Female, age 94, right hemisphere 18.7
2848 Male, age 76, right hemisphere 17.5
1841 Female, age 85, right hemisphere 17.3
Subiculum
nTPM: 17.7
2619 Male, age 74, both hemispheres 20.2
1977 Female, age 85, both hemispheres 18.7
2438 Female, age 94, left hemisphere 18.1
2729 Female, age 91, right hemisphere 17.3
1901 Male, age 80, both hemispheres 16.9
2042 Male, age 76, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 52.9
Min nTPM: 6.6
Std nTPM: 10.5
Median nTPM: 27.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 52.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 52.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 50.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 50.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 48.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 48.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 48.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.3
FF:10169-103B7 60 years, female 10.4
FF:10153-102I9 76 years, female 8.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 32.0
Min nTPM: 16.6
Sample A Female 32.0
Sample B Female 26.1
Sample C Male 22.8
Sample D Male 16.6
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 31.5
Min nTPM: 20.4
Sample A Female 24.6
Sample B Female 27.8
Sample C Male 31.5
Sample D Male 20.4
Subiculum
nTPM: 22.9
Samples: 4

Max nTPM: 32.9
Min nTPM: 18.4
Sample A Female 32.9
Sample B Female 19.5
Sample C Male 20.9
Sample D Male 18.4
Ventral hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 32.2
Min nTPM: 18.7
Sample A Female 27.2
Sample B Female 18.7
Sample C Male 32.2
Sample D Male 22.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.1
Samples: 4

Max nTPM: 65.8
Min nTPM: 62.0
Sample A Male 62.0
Sample B Male 62.8
Sample C Female 65.6
Sample D Female 65.8
Hippocampal formation
nTPM: 63.5
Samples: 4

Max nTPM: 69.5
Min nTPM: 57.6
Sample A Male 64.7
Sample B Male 57.6
Sample C Female 62.0
Sample D Female 69.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69527818 Antisense, RP_050421_02_E06, Mouse strain C57BL/6J (56 days, male) 4.0
73635786 Antisense, RP_051017_04_D12, Mouse strain C57BL/6J (56 days, male) 2.8

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