HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:18.9 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:2.2 nTPM
Mouse:28.0 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020642Antibody HPA050761
Glial cells MediumLow
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
1898 Male, age 80, left hemisphere 20.7
2148 Female, age 91, left hemisphere 19.9
2621 Female, age 67, right hemisphere 19.7
1855 Male, age 76, left hemisphere 19.0
1911 Female, age 85, right hemisphere 18.7
2529 Female, age 94, left hemisphere 18.6
Dentate gyrus
nTPM: 19.3
1927 Female, age 91, both hemispheres 20.1
2528 Male, age 74, both hemispheres 19.7
2530 Female, age 94, left hemisphere 19.4
2010 Male, age 76, both hemispheres 19.0
2531 Female, age 67, both hemispheres 19.0
2246 Female, age 85, both hemispheres 18.6
Entorhinal gyrus
nTPM: 19.8
2764 Male, age 80, right hemisphere 21.0
2613 Female, age 94, left hemisphere 20.7
1787 Male, age 76, left hemisphere 20.1
1938 Female, age 85, left hemisphere 19.6
2686 Male, age 75, right hemisphere 18.9
2117 Female, age 91, right hemisphere 18.5
Hippocampus, CA1
nTPM: 19.7
2749 Male, age 80, left hemisphere 22.1
2527 Male, age 74, both hemispheres 20.1
1873 Female, age 85, both hemispheres 20.0
2045 Male, age 76, both hemispheres 18.6
2082 Female, age 91, right hemisphere 17.9
Hippocampus, CA2
nTPM: 19.0
1892 Male, age 76, both hemispheres 19.8
2249 Male, age 74, both hemispheres 19.6
1963 Male, age 80, left hemisphere 19.2
2437 Female, age 94, left hemisphere 19.0
1940 Female, age 85, left hemisphere 18.5
2113 Female, age 91, right hemisphere 18.2
Hippocampus, CA3
nTPM: 20.0
2620 Female, age 94, left hemisphere 21.1
2861 Female, age 67, both hemispheres 20.9
2137 Male, age 80, left hemisphere 20.5
1867 Male, age 76, both hemispheres 20.1
2436 Male, age 74, both hemispheres 19.0
1891 Female, age 85, both hemispheres 18.6
Parahippocampal cortex
nTPM: 19.4
1933 Female, age 85, both hemispheres 20.3
2018 Male, age 76, both hemispheres 20.2
1990 Female, age 91, right hemisphere 19.8
1850 Male, age 80, both hemispheres 19.5
2250 Female, age 67, right hemisphere 19.5
2532 Female, age 72, left hemisphere 19.4
2245 Female, age 91, both hemispheres 19.3
2693 Female, age 94, both hemispheres 18.8
2622 Female, age 67, right hemisphere 18.7
2692 Male, age 74, both hemispheres 18.4
Perirhinal gyrus
nTPM: 19.7
1794 Male, age 80, right hemisphere 20.4
1847 Female, age 91, left hemisphere 20.1
1841 Female, age 85, right hemisphere 19.9
2848 Male, age 76, right hemisphere 19.4
2521 Female, age 94, right hemisphere 18.8
Subiculum
nTPM: 19.0
1901 Male, age 80, both hemispheres 20.3
1977 Female, age 85, both hemispheres 19.5
2619 Male, age 74, both hemispheres 19.0
2042 Male, age 76, both hemispheres 18.8
2729 Female, age 91, right hemisphere 18.8
2438 Female, age 94, left hemisphere 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.9
Samples: 197

Max nTPM: 42.7
Min nTPM: 7.8
Std nTPM: 5.5
Median nTPM: 18.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 34.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 33.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 32.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 29.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 29.0
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 28.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 28.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 28.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 27.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10153-102I9 76 years, female 13.5
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.6
Sample A Female 2.0
Sample B Female 2.1
Sample C Male 1.6
Sample D Male 2.4
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 2.9
Sample C Male 2.2
Sample D Male 2.1
Subiculum
nTPM: 2.1
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.8
Sample A Female 2.3
Sample B Female 1.8
Sample C Male 2.0
Sample D Male 2.3
Ventral hippocampus
nTPM: 2.2
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.0
Sample A Female 2.0
Sample B Female 2.0
Sample C Male 2.2
Sample D Male 2.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 30.6
Min nTPM: 24.7
Sample A Male 26.9
Sample B Male 29.8
Sample C Female 24.7
Sample D Female 30.6
Hippocampal formation
nTPM: 25.3
Samples: 4

Max nTPM: 27.1
Min nTPM: 23.1
Sample A Male 26.7
Sample B Male 27.1
Sample C Female 23.1
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
79393531 Antisense, RP_071018_01_G02, Mouse strain C57BL/6J (56 days, male) 4.8

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