HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:30.6 nTPM
FANTOM5:12.1 Scaled Tags Per Million
Pig:7.7 nTPM
Mouse:12.9 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043971
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
2529 Female, age 94, left hemisphere 27.5
2148 Female, age 91, left hemisphere 27.2
1911 Female, age 85, right hemisphere 25.9
1855 Male, age 76, left hemisphere 25.6
2621 Female, age 67, right hemisphere 25.4
1898 Male, age 80, left hemisphere 24.4
Dentate gyrus
nTPM: 25.1
2528 Male, age 74, both hemispheres 26.4
2530 Female, age 94, left hemisphere 26.3
1927 Female, age 91, both hemispheres 25.3
2531 Female, age 67, both hemispheres 24.4
2010 Male, age 76, both hemispheres 24.2
2246 Female, age 85, both hemispheres 24.0
Entorhinal gyrus
nTPM: 24.8
2686 Male, age 75, right hemisphere 26.9
2764 Male, age 80, right hemisphere 25.6
2117 Female, age 91, right hemisphere 25.2
1787 Male, age 76, left hemisphere 24.8
2613 Female, age 94, left hemisphere 24.2
1938 Female, age 85, left hemisphere 21.8
Hippocampus, CA1
nTPM: 24.2
2045 Male, age 76, both hemispheres 26.2
2082 Female, age 91, right hemisphere 25.3
1873 Female, age 85, both hemispheres 24.4
2527 Male, age 74, both hemispheres 23.4
2749 Male, age 80, left hemisphere 21.5
Hippocampus, CA2
nTPM: 25.7
1963 Male, age 80, left hemisphere 27.9
2437 Female, age 94, left hemisphere 27.7
1892 Male, age 76, both hemispheres 25.7
2113 Female, age 91, right hemisphere 25.2
2249 Male, age 74, both hemispheres 24.4
1940 Female, age 85, left hemisphere 23.2
Hippocampus, CA3
nTPM: 25.9
2861 Female, age 67, both hemispheres 28.7
2620 Female, age 94, left hemisphere 28.0
2436 Male, age 74, both hemispheres 25.7
1867 Male, age 76, both hemispheres 25.2
1891 Female, age 85, both hemispheres 24.5
2137 Male, age 80, left hemisphere 23.4
Parahippocampal cortex
nTPM: 23.9
2622 Female, age 67, right hemisphere 27.5
2692 Male, age 74, both hemispheres 26.8
1990 Female, age 91, right hemisphere 25.0
2018 Male, age 76, both hemispheres 24.4
2532 Female, age 72, left hemisphere 24.3
2245 Female, age 91, both hemispheres 23.5
2250 Female, age 67, right hemisphere 23.3
2693 Female, age 94, both hemispheres 22.4
1850 Male, age 80, both hemispheres 20.7
1933 Female, age 85, both hemispheres 20.7
Perirhinal gyrus
nTPM: 22.3
2848 Male, age 76, right hemisphere 23.8
2521 Female, age 94, right hemisphere 22.3
1794 Male, age 80, right hemisphere 22.1
1847 Female, age 91, left hemisphere 21.8
1841 Female, age 85, right hemisphere 21.4
Subiculum
nTPM: 25.1
2619 Male, age 74, both hemispheres 26.7
2729 Female, age 91, right hemisphere 26.4
2042 Male, age 76, both hemispheres 25.4
1901 Male, age 80, both hemispheres 24.5
2438 Female, age 94, left hemisphere 24.0
1977 Female, age 85, both hemispheres 23.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.6
Samples: 197

Max nTPM: 45.7
Min nTPM: 15.9
Std nTPM: 5.3
Median nTPM: 30.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 45.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 45.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 45.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 41.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 41.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 40.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 39.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 39.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 39.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 39.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.1
FF:10153-102I9 76 years, female 18.9
FF:10169-103B7 60 years, female 5.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.7
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.1
Sample A Female 8.7
Sample B Female 7.7
Sample C Male 8.1
Sample D Male 6.1
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.2
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 7.2
Sample C Male 7.1
Sample D Male 6.8
Subiculum
nTPM: 6.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.7
Sample A Female 7.9
Sample B Female 5.7
Sample C Male 7.3
Sample D Male 6.0
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.2
Sample A Female 7.3
Sample B Female 6.2
Sample C Male 8.7
Sample D Male 7.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.6
Sample A Male 13.7
Sample B Male 12.2
Sample C Female 11.6
Sample D Female 10.6
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.2
Sample A Male 11.2
Sample B Male 11.7
Sample C Female 12.8
Sample D Female 15.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
69169505 Antisense, RP_050321_03_F12, Mouse strain C57BL/6J (56 days, male) 1.4

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