HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:107.8 nTPM
HPA:107.8 nTPM
GTEx:112.8 nTPM
FANTOM5:103.4 Scaled Tags Per Million
Pig:39.8 nTPM
Mouse:206.2 nTPM
Allen mouse:14.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006065
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.8
Sample id Sample description nTPM
Hippocampus
nTPM: 106.2
1898 Male, age 80, left hemisphere 112.7
2621 Female, age 67, right hemisphere 108.9
2529 Female, age 94, left hemisphere 107.5
1855 Male, age 76, left hemisphere 106.5
2148 Female, age 91, left hemisphere 103.2
1911 Female, age 85, right hemisphere 98.4
Dentate gyrus
nTPM: 104.8
2530 Female, age 94, left hemisphere 115.0
1927 Female, age 91, both hemispheres 109.0
2010 Male, age 76, both hemispheres 106.3
2531 Female, age 67, both hemispheres 100.5
2246 Female, age 85, both hemispheres 99.4
2528 Male, age 74, both hemispheres 98.3
Entorhinal gyrus
nTPM: 104.6
2764 Male, age 80, right hemisphere 109.2
1938 Female, age 85, left hemisphere 105.7
2686 Male, age 75, right hemisphere 105.7
2613 Female, age 94, left hemisphere 103.9
1787 Male, age 76, left hemisphere 103.5
2117 Female, age 91, right hemisphere 99.3
Hippocampus, CA1
nTPM: 105.5
2749 Male, age 80, left hemisphere 118.8
2045 Male, age 76, both hemispheres 106.0
1873 Female, age 85, both hemispheres 104.5
2527 Male, age 74, both hemispheres 101.9
2082 Female, age 91, right hemisphere 96.2
Hippocampus, CA2
nTPM: 106.5
1963 Male, age 80, left hemisphere 117.6
1892 Male, age 76, both hemispheres 114.2
2437 Female, age 94, left hemisphere 105.6
1940 Female, age 85, left hemisphere 104.7
2249 Male, age 74, both hemispheres 99.1
2113 Female, age 91, right hemisphere 97.9
Hippocampus, CA3
nTPM: 104.7
2137 Male, age 80, left hemisphere 110.8
1867 Male, age 76, both hemispheres 109.4
2861 Female, age 67, both hemispheres 103.6
2620 Female, age 94, left hemisphere 103.1
2436 Male, age 74, both hemispheres 101.0
1891 Female, age 85, both hemispheres 100.5
Parahippocampal cortex
nTPM: 103.1
1850 Male, age 80, both hemispheres 112.0
2245 Female, age 91, both hemispheres 106.1
1933 Female, age 85, both hemispheres 105.4
2532 Female, age 72, left hemisphere 104.1
2250 Female, age 67, right hemisphere 102.1
1990 Female, age 91, right hemisphere 101.6
2018 Male, age 76, both hemispheres 101.6
2692 Male, age 74, both hemispheres 100.5
2622 Female, age 67, right hemisphere 100.1
2693 Female, age 94, both hemispheres 97.5
Perirhinal gyrus
nTPM: 107.8
1794 Male, age 80, right hemisphere 111.5
1847 Female, age 91, left hemisphere 111.4
1841 Female, age 85, right hemisphere 107.4
2521 Female, age 94, right hemisphere 106.5
2848 Male, age 76, right hemisphere 102.1
Subiculum
nTPM: 102.1
1901 Male, age 80, both hemispheres 108.5
2619 Male, age 74, both hemispheres 103.6
1977 Female, age 85, both hemispheres 103.3
2438 Female, age 94, left hemisphere 101.5
2042 Male, age 76, both hemispheres 100.6
2729 Female, age 91, right hemisphere 95.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 112.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.8
Samples: 197

Max nTPM: 235.1
Min nTPM: 65.2
Std nTPM: 24.4
Median nTPM: 111.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 235.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 207.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 175.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 168.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 167.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 166.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 166.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 161.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 160.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 158.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 157.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 103.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.4
FF:10169-103B7 60 years, female 115.0
FF:10153-102I9 76 years, female 91.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 46.6
Min nTPM: 27.5
Sample A Female 46.6
Sample B Female 34.1
Sample C Male 39.8
Sample D Male 27.5
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 47.5
Min nTPM: 31.9
Sample A Female 38.4
Sample B Female 47.5
Sample C Male 41.5
Sample D Male 31.9
Subiculum
nTPM: 36.6
Samples: 4

Max nTPM: 51.6
Min nTPM: 29.8
Sample A Female 51.6
Sample B Female 34.1
Sample C Male 30.9
Sample D Male 29.8
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 25.6
Sample A Female 33.0
Sample B Female 25.6
Sample C Male 39.5
Sample D Male 35.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 206.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 187.6
Samples: 4

Max nTPM: 198.0
Min nTPM: 174.0
Sample A Male 174.0
Sample B Male 191.3
Sample C Female 198.0
Sample D Female 186.9
Hippocampal formation
nTPM: 206.2
Samples: 4

Max nTPM: 234.3
Min nTPM: 184.0
Sample A Male 234.3
Sample B Male 184.0
Sample C Female 204.3
Sample D Female 202.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.5
392935 Antisense, RP_040804_02_A06, Mouse strain C57BL/6J (56 days, male) 21.0
73512199 Antisense, RP_050712_04_C08, Mouse strain C57BL/6J (56 days, male) 7.9
70919149 Antisense, RP_050712_04_C08, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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