HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.4 nTPM
HPA:46.4 nTPM
GTEx:65.1 nTPM
FANTOM5:102.0 Scaled Tags Per Million
Mouse:30.9 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076948
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.4
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
1898 Male, age 80, left hemisphere 43.1
2621 Female, age 67, right hemisphere 26.6
1855 Male, age 76, left hemisphere 23.6
2148 Female, age 91, left hemisphere 22.9
2529 Female, age 94, left hemisphere 19.0
1911 Female, age 85, right hemisphere 16.9
Dentate gyrus
nTPM: 25.4
1927 Female, age 91, both hemispheres 45.2
2010 Male, age 76, both hemispheres 29.0
2528 Male, age 74, both hemispheres 25.9
2246 Female, age 85, both hemispheres 20.7
2530 Female, age 94, left hemisphere 17.8
2531 Female, age 67, both hemispheres 13.7
Entorhinal gyrus
nTPM: 29.9
2613 Female, age 94, left hemisphere 44.8
2764 Male, age 80, right hemisphere 39.4
1938 Female, age 85, left hemisphere 36.3
1787 Male, age 76, left hemisphere 31.3
2686 Male, age 75, right hemisphere 15.4
2117 Female, age 91, right hemisphere 12.4
Hippocampus, CA1
nTPM: 35.4
2749 Male, age 80, left hemisphere 72.0
1873 Female, age 85, both hemispheres 33.1
2527 Male, age 74, both hemispheres 30.6
2045 Male, age 76, both hemispheres 22.0
2082 Female, age 91, right hemisphere 19.2
Hippocampus, CA2
nTPM: 28.3
1963 Male, age 80, left hemisphere 45.8
1892 Male, age 76, both hemispheres 45.1
2437 Female, age 94, left hemisphere 23.9
2249 Male, age 74, both hemispheres 23.3
1940 Female, age 85, left hemisphere 16.7
2113 Female, age 91, right hemisphere 15.0
Hippocampus, CA3
nTPM: 27.6
2137 Male, age 80, left hemisphere 41.1
1867 Male, age 76, both hemispheres 37.9
2436 Male, age 74, both hemispheres 25.8
1891 Female, age 85, both hemispheres 23.2
2620 Female, age 94, left hemisphere 21.3
2861 Female, age 67, both hemispheres 16.3
Parahippocampal cortex
nTPM: 31.7
1990 Female, age 91, right hemisphere 50.1
1850 Male, age 80, both hemispheres 46.8
2693 Female, age 94, both hemispheres 40.6
2245 Female, age 91, both hemispheres 32.2
2250 Female, age 67, right hemisphere 31.5
1933 Female, age 85, both hemispheres 31.0
2532 Female, age 72, left hemisphere 26.4
2622 Female, age 67, right hemisphere 22.9
2018 Male, age 76, both hemispheres 21.0
2692 Male, age 74, both hemispheres 14.3
Perirhinal gyrus
nTPM: 46.4
1847 Female, age 91, left hemisphere 73.6
2521 Female, age 94, right hemisphere 52.8
1794 Male, age 80, right hemisphere 41.9
1841 Female, age 85, right hemisphere 35.2
2848 Male, age 76, right hemisphere 28.6
Subiculum
nTPM: 25.8
2438 Female, age 94, left hemisphere 36.7
1977 Female, age 85, both hemispheres 31.5
1901 Male, age 80, both hemispheres 30.5
2619 Male, age 74, both hemispheres 25.7
2042 Male, age 76, both hemispheres 16.8
2729 Female, age 91, right hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.1
Samples: 197

Max nTPM: 168.5
Min nTPM: 18.1
Std nTPM: 38.2
Median nTPM: 54.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 168.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 167.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 166.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 160.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 159.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 154.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 149.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 148.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 147.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 145.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 139.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.0
FF:10169-103B7 60 years, female 142.3
FF:10153-102I9 76 years, female 61.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 35.4
Min nTPM: 26.5
Sample A Male 26.5
Sample B Male 35.4
Sample C Female 31.9
Sample D Female 29.9
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 27.7
Min nTPM: 22.9
Sample A Male 26.5
Sample B Male 27.7
Sample C Female 22.9
Sample D Female 27.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68666553 Antisense, RP_050126_02_E04, Mouse strain C57BL/6J (56 days, male) 6.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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