COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.0 nTPM
HPA:14.0 nTPM
GTEx:13.9 nTPM
FANTOM5:7.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 14.0
overview
Male, age 54 		Colon sample 67
nTPM: 20.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 9.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 19.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 12
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 15.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 15.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 12.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 13.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 16.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 15.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.2
Samples: 373

Max nTPM: 33.0
Min nTPM: 3.2
Std nTPM: 3.1
Median nTPM: 8.6
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 33.0
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 30.4
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 19.8
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 18.2
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 18.1
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 17.9
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 17.1
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 15.8
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 15.6
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 15.5
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 15.4
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Colon - Transverse
Average nTPM: 13.9
Samples: 406

Max nTPM: 47.4
Min nTPM: 4.3
Std nTPM: 6.1
Median nTPM: 12.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 47.4
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 37.3
GTEX-1J1R8-1126-SM-CNPQ3 40-49 years, male 34.2
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 33.5
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 32.7
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 32.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 31.5
GTEX-14JIY-3326-SM-6871E 60-69 years, male 31.0
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 30.8
GTEX-11DXX-1826-SM-5H126 60-69 years, female 30.7
GTEX-1B8KE-1926-SM-731EE 50-59 years, male 30.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 7.7
FF:10014-101C5 62,83,84 years, mixed 7.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.