HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:45.5 nTPM
HPA:45.5 nTPM
GTEx:4.4 nTPM
FANTOM5:100.2 Scaled Tags Per Million
Pig:51.2 nTPM
Mouse:59.6 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.5
Sample id Sample description nTPM
Hippocampus
nTPM: 20.4
2148 Female, age 91, left hemisphere 44.8
2621 Female, age 67, right hemisphere 22.1
1855 Male, age 76, left hemisphere 18.7
1898 Male, age 80, left hemisphere 17.2
1911 Female, age 85, right hemisphere 9.8
2529 Female, age 94, left hemisphere 9.6
Dentate gyrus
nTPM: 35.2
2531 Female, age 67, both hemispheres 97.9
1927 Female, age 91, both hemispheres 40.6
2528 Male, age 74, both hemispheres 34.0
2246 Female, age 85, both hemispheres 20.9
2010 Male, age 76, both hemispheres 17.9
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 4.9
2764 Male, age 80, right hemisphere 29.8
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 43.7
2045 Male, age 76, both hemispheres 94.7
2749 Male, age 80, left hemisphere 36.4
2082 Female, age 91, right hemisphere 35.0
2527 Male, age 74, both hemispheres 30.8
1873 Female, age 85, both hemispheres 21.4
Hippocampus, CA2
nTPM: 8.6
2113 Female, age 91, right hemisphere 18.2
2249 Male, age 74, both hemispheres 17.5
1892 Male, age 76, both hemispheres 15.9
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 45.5
2620 Female, age 94, left hemisphere 121.5
2861 Female, age 67, both hemispheres 71.8
1867 Male, age 76, both hemispheres 35.9
2137 Male, age 80, left hemisphere 16.3
1891 Female, age 85, both hemispheres 15.7
2436 Male, age 74, both hemispheres 11.8
Parahippocampal cortex
nTPM: 14.4
2018 Male, age 76, both hemispheres 38.5
2250 Female, age 67, right hemisphere 24.5
1850 Male, age 80, both hemispheres 16.7
2245 Female, age 91, both hemispheres 16.7
2532 Female, age 72, left hemisphere 13.3
2693 Female, age 94, both hemispheres 13.2
1933 Female, age 85, both hemispheres 12.6
2622 Female, age 67, right hemisphere 8.8
1990 Female, age 91, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 22.0
2521 Female, age 94, right hemisphere 28.2
1794 Male, age 80, right hemisphere 26.7
2848 Male, age 76, right hemisphere 21.3
1841 Female, age 85, right hemisphere 16.8
1847 Female, age 91, left hemisphere 16.8
Subiculum
nTPM: 8.9
2729 Female, age 91, right hemisphere 42.4
1977 Female, age 85, both hemispheres 6.0
1901 Male, age 80, both hemispheres 5.2
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.4
Samples: 197

Max nTPM: 55.3
Min nTPM: 0.0
Std nTPM: 6.9
Median nTPM: 1.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 55.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 37.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 36.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 30.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 24.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 18.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 16.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 15.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 15.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 15.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 15.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.2
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 71.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 55.2
Min nTPM: 24.9
Sample A Female 24.9
Sample B Female 50.3
Sample C Male 45.1
Sample D Male 55.2
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 36.3
Min nTPM: 19.1
Sample A Female 26.8
Sample B Female 19.1
Sample C Male 36.3
Sample D Male 24.7
Subiculum
nTPM: 51.2
Samples: 4

Max nTPM: 65.3
Min nTPM: 37.7
Sample A Female 47.9
Sample B Female 37.7
Sample C Male 65.3
Sample D Male 53.7
Ventral hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 71.8
Min nTPM: 23.2
Sample A Female 29.0
Sample B Female 71.8
Sample C Male 62.3
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.6
Samples: 4

Max nTPM: 65.7
Min nTPM: 53.4
Sample A Male 53.4
Sample B Male 54.2
Sample C Female 64.9
Sample D Female 65.7
Hippocampal formation
nTPM: 59.2
Samples: 4

Max nTPM: 65.6
Min nTPM: 52.0
Sample A Male 64.5
Sample B Male 65.6
Sample C Female 52.0
Sample D Female 54.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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