COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.5 nTPM
HPA:6.7 nTPM
GTEx:36.5 nTPM
FANTOM5:52.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA001196
Glandular cells Low

COLON - HPA RNA-seqi
Average nTPM 6.7
overview
Male, age 54 		Colon sample 67
nTPM: 4.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 5.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 6.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 36.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 36.5
Samples: 373

Max nTPM: 73.2
Min nTPM: 1.7
Std nTPM: 13.2
Median nTPM: 35.9
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 73.2
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 72.6
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 69.9
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 69.5
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 67.2
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 66.3
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 66.0
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 64.3
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 62.4
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 62.1
GTEX-15RIF-1426-SM-7KUKQ 20-29 years, male 61.8
Show allShow less
Colon - Transverse
Average nTPM: 15.5
Samples: 406

Max nTPM: 57.3
Min nTPM: 1.0
Std nTPM: 12.8
Median nTPM: 12.0
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 57.3
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 54.0
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 52.1
GTEX-1RAZQ-2126-SM-DTX9V 30-39 years, male 50.1
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 49.3
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 49.0
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 48.3
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 47.7
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 46.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 45.3
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 45.2
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 52.5
FF:10014-101C5 62,83,84 years, mixed 52.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.