HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.5 nTPM
HPA:44.5 nTPM
GTEx:86.8 nTPM
FANTOM5:112.5 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:24.5 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020338
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.5
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
1898 Male, age 80, left hemisphere 40.3
2621 Female, age 67, right hemisphere 40.0
1911 Female, age 85, right hemisphere 38.6
1855 Male, age 76, left hemisphere 37.3
2529 Female, age 94, left hemisphere 36.0
2148 Female, age 91, left hemisphere 34.4
Dentate gyrus
nTPM: 39.8
2530 Female, age 94, left hemisphere 49.0
2010 Male, age 76, both hemispheres 47.7
2246 Female, age 85, both hemispheres 38.4
2531 Female, age 67, both hemispheres 34.9
1927 Female, age 91, both hemispheres 34.4
2528 Male, age 74, both hemispheres 34.2
Entorhinal gyrus
nTPM: 39.5
2117 Female, age 91, right hemisphere 48.6
2764 Male, age 80, right hemisphere 43.2
2613 Female, age 94, left hemisphere 38.0
1787 Male, age 76, left hemisphere 37.0
1938 Female, age 85, left hemisphere 35.6
2686 Male, age 75, right hemisphere 34.6
Hippocampus, CA1
nTPM: 39.2
2749 Male, age 80, left hemisphere 44.8
1873 Female, age 85, both hemispheres 39.4
2527 Male, age 74, both hemispheres 38.8
2045 Male, age 76, both hemispheres 38.1
2082 Female, age 91, right hemisphere 34.9
Hippocampus, CA2
nTPM: 39.8
1963 Male, age 80, left hemisphere 46.4
2249 Male, age 74, both hemispheres 41.2
1892 Male, age 76, both hemispheres 40.3
1940 Female, age 85, left hemisphere 38.3
2437 Female, age 94, left hemisphere 37.7
2113 Female, age 91, right hemisphere 34.8
Hippocampus, CA3
nTPM: 34.9
1891 Female, age 85, both hemispheres 44.4
1867 Male, age 76, both hemispheres 39.2
2620 Female, age 94, left hemisphere 35.9
2137 Male, age 80, left hemisphere 33.2
2436 Male, age 74, both hemispheres 30.8
2861 Female, age 67, both hemispheres 25.9
Parahippocampal cortex
nTPM: 37.0
2532 Female, age 72, left hemisphere 45.9
2692 Male, age 74, both hemispheres 42.6
1850 Male, age 80, both hemispheres 41.9
1990 Female, age 91, right hemisphere 40.4
2018 Male, age 76, both hemispheres 40.1
2245 Female, age 91, both hemispheres 36.1
1933 Female, age 85, both hemispheres 35.3
2693 Female, age 94, both hemispheres 34.1
2250 Female, age 67, right hemisphere 27.0
2622 Female, age 67, right hemisphere 26.9
Perirhinal gyrus
nTPM: 37.5
1794 Male, age 80, right hemisphere 41.4
2521 Female, age 94, right hemisphere 40.6
2848 Male, age 76, right hemisphere 35.8
1847 Female, age 91, left hemisphere 35.6
1841 Female, age 85, right hemisphere 34.1
Subiculum
nTPM: 44.5
2438 Female, age 94, left hemisphere 54.4
2042 Male, age 76, both hemispheres 52.1
1901 Male, age 80, both hemispheres 46.4
1977 Female, age 85, both hemispheres 44.6
2619 Male, age 74, both hemispheres 38.9
2729 Female, age 91, right hemisphere 30.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 86.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.8
Samples: 197

Max nTPM: 513.0
Min nTPM: 22.1
Std nTPM: 53.5
Median nTPM: 73.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 513.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 305.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 276.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 245.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 243.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 228.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 222.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 179.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 166.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 165.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 161.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.5
FF:10169-103B7 60 years, female 113.0
FF:10153-102I9 76 years, female 112.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 47.6
Min nTPM: 20.9
Sample A Female 47.6
Sample B Female 31.1
Sample C Male 34.1
Sample D Male 20.9
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 24.1
Min nTPM: 17.7
Sample A Female 21.1
Sample B Female 24.1
Sample C Male 17.7
Sample D Male 19.6
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.8
Sample A Female 22.1
Sample B Female 19.0
Sample C Male 13.8
Sample D Male 14.4
Ventral hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 34.2
Min nTPM: 13.8
Sample A Female 21.6
Sample B Female 13.8
Sample C Male 19.7
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 24.2
Min nTPM: 19.3
Sample A Male 24.2
Sample B Male 20.9
Sample C Female 19.3
Sample D Female 20.1
Hippocampal formation
nTPM: 24.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 22.0
Sample A Male 22.0
Sample B Male 25.5
Sample C Female 27.1
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69443427 Antisense, RP_050414_04_A11, Mouse strain C57BL/6J (56 days, male) 1.8

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