HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.6 nTPM
HPA:60.6 nTPM
GTEx:46.7 nTPM
FANTOM5:78.6 Scaled Tags Per Million
Pig:36.7 nTPM
Mouse:168.7 nTPM
Allen mouse:22.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003197Antibody HPA003198
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.6
Sample id Sample description nTPM
Hippocampus
nTPM: 58.0
1898 Male, age 80, left hemisphere 66.4
2621 Female, age 67, right hemisphere 57.9
2529 Female, age 94, left hemisphere 57.4
1855 Male, age 76, left hemisphere 55.8
2148 Female, age 91, left hemisphere 55.4
1911 Female, age 85, right hemisphere 55.2
Dentate gyrus
nTPM: 56.8
1927 Female, age 91, both hemispheres 62.9
2010 Male, age 76, both hemispheres 60.0
2528 Male, age 74, both hemispheres 58.6
2246 Female, age 85, both hemispheres 54.6
2531 Female, age 67, both hemispheres 52.5
2530 Female, age 94, left hemisphere 52.4
Entorhinal gyrus
nTPM: 55.6
1938 Female, age 85, left hemisphere 59.7
2764 Male, age 80, right hemisphere 57.7
2117 Female, age 91, right hemisphere 56.1
1787 Male, age 76, left hemisphere 56.0
2686 Male, age 75, right hemisphere 53.8
2613 Female, age 94, left hemisphere 50.1
Hippocampus, CA1
nTPM: 60.6
2749 Male, age 80, left hemisphere 72.0
1873 Female, age 85, both hemispheres 61.5
2045 Male, age 76, both hemispheres 58.2
2527 Male, age 74, both hemispheres 58.2
2082 Female, age 91, right hemisphere 52.8
Hippocampus, CA2
nTPM: 58.3
1892 Male, age 76, both hemispheres 65.4
1963 Male, age 80, left hemisphere 64.1
2249 Male, age 74, both hemispheres 60.0
2113 Female, age 91, right hemisphere 53.8
2437 Female, age 94, left hemisphere 53.4
1940 Female, age 85, left hemisphere 53.1
Hippocampus, CA3
nTPM: 58.9
1867 Male, age 76, both hemispheres 63.5
2436 Male, age 74, both hemispheres 62.9
2137 Male, age 80, left hemisphere 62.7
1891 Female, age 85, both hemispheres 56.5
2620 Female, age 94, left hemisphere 54.2
2861 Female, age 67, both hemispheres 53.6
Parahippocampal cortex
nTPM: 56.4
1850 Male, age 80, both hemispheres 62.4
1933 Female, age 85, both hemispheres 59.6
1990 Female, age 91, right hemisphere 59.4
2250 Female, age 67, right hemisphere 57.3
2245 Female, age 91, both hemispheres 55.6
2018 Male, age 76, both hemispheres 55.3
2532 Female, age 72, left hemisphere 54.7
2692 Male, age 74, both hemispheres 53.8
2622 Female, age 67, right hemisphere 53.5
2693 Female, age 94, both hemispheres 52.3
Perirhinal gyrus
nTPM: 59.6
1847 Female, age 91, left hemisphere 65.1
1841 Female, age 85, right hemisphere 61.7
1794 Male, age 80, right hemisphere 60.3
2521 Female, age 94, right hemisphere 56.2
2848 Male, age 76, right hemisphere 54.5
Subiculum
nTPM: 56.1
1901 Male, age 80, both hemispheres 59.1
1977 Female, age 85, both hemispheres 57.7
2042 Male, age 76, both hemispheres 56.6
2729 Female, age 91, right hemisphere 55.1
2619 Male, age 74, both hemispheres 54.7
2438 Female, age 94, left hemisphere 53.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.7
Samples: 197

Max nTPM: 81.1
Min nTPM: 24.3
Std nTPM: 11.4
Median nTPM: 44.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 81.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 80.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 76.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 72.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 72.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 70.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 69.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 68.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.6
FF:10169-103B7 60 years, female 95.2
FF:10153-102I9 76 years, female 62.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.7
Samples: 4

Max nTPM: 42.7
Min nTPM: 32.5
Sample A Female 42.7
Sample B Female 32.5
Sample C Male 38.8
Sample D Male 32.9
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 40.9
Min nTPM: 28.7
Sample A Female 35.9
Sample B Female 40.9
Sample C Male 29.9
Sample D Male 28.7
Subiculum
nTPM: 35.3
Samples: 4

Max nTPM: 42.8
Min nTPM: 30.9
Sample A Female 42.8
Sample B Female 30.9
Sample C Male 31.2
Sample D Male 36.1
Ventral hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 38.4
Min nTPM: 28.6
Sample A Female 38.4
Sample B Female 28.6
Sample C Male 30.2
Sample D Male 34.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 168.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 151.7
Samples: 4

Max nTPM: 159.7
Min nTPM: 142.9
Sample A Male 142.9
Sample B Male 145.2
Sample C Female 158.8
Sample D Female 159.7
Hippocampal formation
nTPM: 168.8
Samples: 4

Max nTPM: 173.8
Min nTPM: 163.9
Sample A Male 171.7
Sample B Male 165.7
Sample C Female 173.8
Sample D Female 163.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.5
356082 Antisense, RP_040617_01_G03, Mouse strain C57BL/6J (56 days, male) 22.5
293916 Antisense, RP_040617_01_G03, Mouse strain C57BL/6J (56 days, male) 17.9

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