HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.8 nTPM
HPA:19.8 nTPM
GTEx:14.2 nTPM
FANTOM5:10.9 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:14.4 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037635Antibody HPA038371
Glial cells Not detectedLow
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.8
Sample id Sample description nTPM
Hippocampus
nTPM: 19.8
2529 Female, age 94, left hemisphere 21.6
1855 Male, age 76, left hemisphere 20.5
1898 Male, age 80, left hemisphere 19.6
2148 Female, age 91, left hemisphere 19.6
2621 Female, age 67, right hemisphere 19.2
1911 Female, age 85, right hemisphere 18.5
Dentate gyrus
nTPM: 18.5
2010 Male, age 76, both hemispheres 19.8
1927 Female, age 91, both hemispheres 19.1
2530 Female, age 94, left hemisphere 18.9
2246 Female, age 85, both hemispheres 18.3
2528 Male, age 74, both hemispheres 18.0
2531 Female, age 67, both hemispheres 16.9
Entorhinal gyrus
nTPM: 18.9
2117 Female, age 91, right hemisphere 20.9
1938 Female, age 85, left hemisphere 19.4
2686 Male, age 75, right hemisphere 19.1
1787 Male, age 76, left hemisphere 19.0
2764 Male, age 80, right hemisphere 18.3
2613 Female, age 94, left hemisphere 16.8
Hippocampus, CA1
nTPM: 19.5
2749 Male, age 80, left hemisphere 22.9
2527 Male, age 74, both hemispheres 19.4
1873 Female, age 85, both hemispheres 19.0
2082 Female, age 91, right hemisphere 18.1
2045 Male, age 76, both hemispheres 18.0
Hippocampus, CA2
nTPM: 18.8
1963 Male, age 80, left hemisphere 21.6
1892 Male, age 76, both hemispheres 18.8
2113 Female, age 91, right hemisphere 18.5
2437 Female, age 94, left hemisphere 18.2
1940 Female, age 85, left hemisphere 17.9
2249 Male, age 74, both hemispheres 17.7
Hippocampus, CA3
nTPM: 19.7
2861 Female, age 67, both hemispheres 21.3
2137 Male, age 80, left hemisphere 20.3
2436 Male, age 74, both hemispheres 20.0
1867 Male, age 76, both hemispheres 19.9
1891 Female, age 85, both hemispheres 18.3
2620 Female, age 94, left hemisphere 18.3
Parahippocampal cortex
nTPM: 18.2
2692 Male, age 74, both hemispheres 19.8
2622 Female, age 67, right hemisphere 19.1
1933 Female, age 85, both hemispheres 18.9
2245 Female, age 91, both hemispheres 18.8
2018 Male, age 76, both hemispheres 18.4
1990 Female, age 91, right hemisphere 18.1
1850 Male, age 80, both hemispheres 17.5
2250 Female, age 67, right hemisphere 17.4
2532 Female, age 72, left hemisphere 17.4
2693 Female, age 94, both hemispheres 16.2
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 17.9
2521 Female, age 94, right hemisphere 17.3
1794 Male, age 80, right hemisphere 17.1
1841 Female, age 85, right hemisphere 16.9
2848 Male, age 76, right hemisphere 16.2
Subiculum
nTPM: 19.4
2042 Male, age 76, both hemispheres 20.4
2438 Female, age 94, left hemisphere 20.1
2619 Male, age 74, both hemispheres 19.8
2729 Female, age 91, right hemisphere 18.9
1901 Male, age 80, both hemispheres 18.7
1977 Female, age 85, both hemispheres 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.2
Samples: 197

Max nTPM: 21.9
Min nTPM: 9.0
Std nTPM: 2.0
Median nTPM: 14.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 21.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 21.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 21.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 20.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 19.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 19.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 19.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 18.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 18.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 17.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.9
FF:10153-102I9 76 years, female 15.5
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 30.9
Min nTPM: 17.4
Sample A Female 30.9
Sample B Female 27.9
Sample C Male 24.1
Sample D Male 17.4
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 25.4
Min nTPM: 17.6
Sample A Female 25.4
Sample B Female 19.7
Sample C Male 22.0
Sample D Male 17.6
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 25.4
Min nTPM: 17.7
Sample A Female 25.4
Sample B Female 17.7
Sample C Male 21.5
Sample D Male 20.1
Ventral hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 30.1
Min nTPM: 16.5
Sample A Female 20.1
Sample B Female 16.5
Sample C Male 25.7
Sample D Male 30.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.8
Sample A Male 13.9
Sample B Male 10.8
Sample C Female 13.4
Sample D Female 14.0
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 18.8
Min nTPM: 10.2
Sample A Male 10.2
Sample B Male 14.5
Sample C Female 18.8
Sample D Female 14.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68498552 Antisense, RP_050113_02_A10, Mouse strain C57BL/6J (56 days, male) 2.8

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