HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:123.3 nTPM
HPA:123.3 nTPM
GTEx:106.3 nTPM
FANTOM5:108.1 Scaled Tags Per Million
Pig:100.3 nTPM
Mouse:390.8 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038521Antibody HPA038522
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.3
Sample id Sample description nTPM
Hippocampus
nTPM: 95.4
1898 Male, age 80, left hemisphere 117.1
2621 Female, age 67, right hemisphere 98.0
1855 Male, age 76, left hemisphere 94.2
2529 Female, age 94, left hemisphere 89.1
1911 Female, age 85, right hemisphere 88.7
2148 Female, age 91, left hemisphere 85.5
Dentate gyrus
nTPM: 95.4
2530 Female, age 94, left hemisphere 114.1
2010 Male, age 76, both hemispheres 104.0
1927 Female, age 91, both hemispheres 98.9
2528 Male, age 74, both hemispheres 89.9
2531 Female, age 67, both hemispheres 84.3
2246 Female, age 85, both hemispheres 81.0
Entorhinal gyrus
nTPM: 123.3
2613 Female, age 94, left hemisphere 148.7
2764 Male, age 80, right hemisphere 142.5
1787 Male, age 76, left hemisphere 128.6
1938 Female, age 85, left hemisphere 125.8
2117 Female, age 91, right hemisphere 105.8
2686 Male, age 75, right hemisphere 88.5
Hippocampus, CA1
nTPM: 103.9
2749 Male, age 80, left hemisphere 158.4
1873 Female, age 85, both hemispheres 103.8
2527 Male, age 74, both hemispheres 91.3
2082 Female, age 91, right hemisphere 84.4
2045 Male, age 76, both hemispheres 81.9
Hippocampus, CA2
nTPM: 104.1
1963 Male, age 80, left hemisphere 134.7
1892 Male, age 76, both hemispheres 115.9
2437 Female, age 94, left hemisphere 104.9
2249 Male, age 74, both hemispheres 96.8
2113 Female, age 91, right hemisphere 86.9
1940 Female, age 85, left hemisphere 85.3
Hippocampus, CA3
nTPM: 96.5
2137 Male, age 80, left hemisphere 113.7
1867 Male, age 76, both hemispheres 104.5
2620 Female, age 94, left hemisphere 96.4
1891 Female, age 85, both hemispheres 95.5
2861 Female, age 67, both hemispheres 86.1
2436 Male, age 74, both hemispheres 83.0
Parahippocampal cortex
nTPM: 101.3
1850 Male, age 80, both hemispheres 132.5
1933 Female, age 85, both hemispheres 109.4
1990 Female, age 91, right hemisphere 109.3
2532 Female, age 72, left hemisphere 102.8
2693 Female, age 94, both hemispheres 100.1
2692 Male, age 74, both hemispheres 97.3
2018 Male, age 76, both hemispheres 96.7
2245 Female, age 91, both hemispheres 95.4
2622 Female, age 67, right hemisphere 86.2
2250 Female, age 67, right hemisphere 83.6
Perirhinal gyrus
nTPM: 123.2
1794 Male, age 80, right hemisphere 142.0
1847 Female, age 91, left hemisphere 132.9
2848 Male, age 76, right hemisphere 115.5
1841 Female, age 85, right hemisphere 113.8
2521 Female, age 94, right hemisphere 111.6
Subiculum
nTPM: 100.2
1977 Female, age 85, both hemispheres 115.5
1901 Male, age 80, both hemispheres 112.2
2438 Female, age 94, left hemisphere 99.9
2619 Male, age 74, both hemispheres 96.4
2042 Male, age 76, both hemispheres 95.0
2729 Female, age 91, right hemisphere 82.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.3
Samples: 197

Max nTPM: 192.4
Min nTPM: 23.4
Std nTPM: 32.4
Median nTPM: 104.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 192.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 185.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 175.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 174.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 173.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 172.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 172.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 172.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 171.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 171.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 170.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.1
FF:10153-102I9 76 years, female 110.6
FF:10169-103B7 60 years, female 105.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 100.3
Samples: 4

Max nTPM: 144.9
Min nTPM: 62.1
Sample A Female 144.9
Sample B Female 104.2
Sample C Male 89.9
Sample D Male 62.1
Entorhinal cortex
nTPM: 83.4
Samples: 4

Max nTPM: 94.1
Min nTPM: 73.2
Sample A Female 83.8
Sample B Female 94.1
Sample C Male 82.3
Sample D Male 73.2
Subiculum
nTPM: 78.6
Samples: 4

Max nTPM: 107.1
Min nTPM: 59.4
Sample A Female 107.1
Sample B Female 72.5
Sample C Male 75.3
Sample D Male 59.4
Ventral hippocampus
nTPM: 93.8
Samples: 4

Max nTPM: 114.0
Min nTPM: 62.2
Sample A Female 100.7
Sample B Female 62.2
Sample C Male 114.0
Sample D Male 98.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 390.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 390.8
Samples: 4

Max nTPM: 418.2
Min nTPM: 363.7
Sample A Male 374.7
Sample B Male 418.2
Sample C Female 363.7
Sample D Female 406.7
Hippocampal formation
nTPM: 334.3
Samples: 4

Max nTPM: 354.1
Min nTPM: 308.1
Sample A Male 354.1
Sample B Male 308.1
Sample C Female 336.4
Sample D Female 338.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
2034 Antisense, RP_Baylor_102631, Mouse strain C57BL/6J (56 days, male) 21.4
2033 Antisense, RP_Baylor_102631, Mouse strain C57BL/6J (56 days, male) 19.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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