HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:70.6 nTPM
HPA:70.6 nTPM
GTEx:58.3 nTPM
FANTOM5:122.9 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:34.9 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037709Antibody HPA044868
Glial cells LowNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.0
1855 Male, age 76, left hemisphere 73.5
2529 Female, age 94, left hemisphere 72.9
2148 Female, age 91, left hemisphere 67.5
2621 Female, age 67, right hemisphere 65.9
1898 Male, age 80, left hemisphere 65.1
1911 Female, age 85, right hemisphere 62.9
Dentate gyrus
nTPM: 62.7
2528 Male, age 74, both hemispheres 70.2
2010 Male, age 76, both hemispheres 66.3
2246 Female, age 85, both hemispheres 64.8
2530 Female, age 94, left hemisphere 63.6
1927 Female, age 91, both hemispheres 58.3
2531 Female, age 67, both hemispheres 52.7
Entorhinal gyrus
nTPM: 65.3
2117 Female, age 91, right hemisphere 84.1
1787 Male, age 76, left hemisphere 68.4
1938 Female, age 85, left hemisphere 65.3
2764 Male, age 80, right hemisphere 63.7
2613 Female, age 94, left hemisphere 57.8
2686 Male, age 75, right hemisphere 52.5
Hippocampus, CA1
nTPM: 64.9
2527 Male, age 74, both hemispheres 76.1
2045 Male, age 76, both hemispheres 65.2
1873 Female, age 85, both hemispheres 63.8
2082 Female, age 91, right hemisphere 63.3
2749 Male, age 80, left hemisphere 55.8
Hippocampus, CA2
nTPM: 65.3
2249 Male, age 74, both hemispheres 71.6
2113 Female, age 91, right hemisphere 69.7
1940 Female, age 85, left hemisphere 67.0
2437 Female, age 94, left hemisphere 64.6
1892 Male, age 76, both hemispheres 62.0
1963 Male, age 80, left hemisphere 56.8
Hippocampus, CA3
nTPM: 65.1
2436 Male, age 74, both hemispheres 85.4
2620 Female, age 94, left hemisphere 66.4
1867 Male, age 76, both hemispheres 65.8
1891 Female, age 85, both hemispheres 65.8
2137 Male, age 80, left hemisphere 57.3
2861 Female, age 67, both hemispheres 49.6
Parahippocampal cortex
nTPM: 67.8
2250 Female, age 67, right hemisphere 73.5
2692 Male, age 74, both hemispheres 72.9
2018 Male, age 76, both hemispheres 70.3
2245 Female, age 91, both hemispheres 68.3
2622 Female, age 67, right hemisphere 66.8
1990 Female, age 91, right hemisphere 66.7
1850 Male, age 80, both hemispheres 66.4
1933 Female, age 85, both hemispheres 65.5
2532 Female, age 72, left hemisphere 64.4
2693 Female, age 94, both hemispheres 63.0
Perirhinal gyrus
nTPM: 65.2
1847 Female, age 91, left hemisphere 68.0
1794 Male, age 80, right hemisphere 67.3
1841 Female, age 85, right hemisphere 64.9
2521 Female, age 94, right hemisphere 64.0
2848 Male, age 76, right hemisphere 61.7
Subiculum
nTPM: 70.6
2619 Male, age 74, both hemispheres 83.8
2042 Male, age 76, both hemispheres 75.7
2729 Female, age 91, right hemisphere 71.3
1901 Male, age 80, both hemispheres 66.8
1977 Female, age 85, both hemispheres 63.7
2438 Female, age 94, left hemisphere 62.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.3
Samples: 197

Max nTPM: 110.0
Min nTPM: 26.0
Std nTPM: 16.2
Median nTPM: 55.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 110.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 105.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 105.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 104.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 103.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 102.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 100.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 96.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 91.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 91.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 88.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.9
FF:10153-102I9 76 years, female 123.4
FF:10169-103B7 60 years, female 122.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 34.6
Min nTPM: 22.1
Sample A Female 34.6
Sample B Female 25.3
Sample C Male 28.7
Sample D Male 22.1
Entorhinal cortex
nTPM: 25.9
Samples: 4

Max nTPM: 29.9
Min nTPM: 22.6
Sample A Female 29.9
Sample B Female 22.6
Sample C Male 26.8
Sample D Male 24.2
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 33.2
Min nTPM: 25.5
Sample A Female 33.2
Sample B Female 25.5
Sample C Male 27.2
Sample D Male 27.2
Ventral hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 35.0
Min nTPM: 20.2
Sample A Female 28.3
Sample B Female 20.2
Sample C Male 35.0
Sample D Male 27.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.3
Samples: 4

Max nTPM: 35.3
Min nTPM: 31.7
Sample A Male 35.1
Sample B Male 31.7
Sample C Female 35.2
Sample D Female 35.3
Hippocampal formation
nTPM: 35.0
Samples: 4

Max nTPM: 38.0
Min nTPM: 29.8
Sample A Male 29.8
Sample B Male 34.5
Sample C Female 37.5
Sample D Female 38.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
68148756 Antisense, RP_041116_02_B11, Mouse strain C57BL/6J (56 days, male) 4.4

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