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                                TISSUE PRIMARY DATA RETINA Show tissue menu
                                ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
                                EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
                                OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
                                SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
                                ANTIBODIES
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                                VALIDATION
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                                Tissue proteome
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                                Retina
                                RETINA - Expression summary
                                Protein profiling
                                Multiplex tissuei

                                A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

                                Protein expressioni

                                On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                Read more
                                No data
                                RNA expressioni

                                A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                Scroll down to view mRNA expression data in more detail.
                                Read more
                                Consensus:48.5 nTPM
                                GTEx:48.5 nTPM
                                FANTOM5:201.7 Scaled Tags Per Million
                                Pig:19.5 nTPM
                                Mouse:96.6 nTPM

                                RETINA - GTEx RNA-seqi

                                RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

                                Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                Read more
                                Average nTPM 48.5
                                GTEx sample id Sample description nTPM
                                41.048.656.018.874.801020304050607080
                                41.048.656.018.874.801020304050607080
                                Retina
                                Average nTPM: 48.5
                                Samples: 105

                                Max nTPM: 81.6
                                Min nTPM: 11.9
                                Std nTPM: 13.8
                                Median nTPM:
                                347_1 72 years, male 81.6
                                173_1 67 years, male 81.4
                                384_1 83 years, male 78.6
                                218_1 71 years, female 74.8
                                311_1 78 years, male 74.4
                                145_1 84 years, male 74.1
                                379_1 60 years, male 74.1
                                41_1 94 years, female 73.2
                                314_1 67 years, male 70.4
                                99_1 64 years, male 67.4
                                447_1 81 years, male 66.6
                                375_1 74 years, female 64.7
                                322_1 76 years, male 62.8
                                237_1 82 years, male 62.7
                                506_1 65 years, male 62.0
                                264_1 73 years, female 59.7
                                172_1 72 years, female 59.2
                                6_1 73 years, female 59.1
                                308_1 70 years, female 58.8
                                386_1 76 years, male 58.3
                                452_1 88 years, female 58.3
                                317_1 60 years, male 57.9
                                389_1 86 years, female 57.9
                                295_1 61 years, female 57.8
                                396_1 62 years, male 56.9
                                349_1 83 years, male 56.1
                                4_1 88 years, female 56.0
                                120_1 70 years, female 55.6
                                353_1 82 years, female 55.2
                                350_1 84 years, female 55.0
                                351_1 91 years, male 54.8
                                17_1 71 years, male 54.5
                                315_1 62 years, female 54.5
                                354_1 81 years, female 54.4
                                265_1 87 years, male 54.2
                                348_1 84 years, male 54.2
                                394_1 75 years, female 53.5
                                115_1 83 years, male 53.4
                                137_1 83 years, male 52.6
                                352_1 62 years, male 52.6
                                307_1 66 years, female 52.2
                                177_1 74 years, male 52.1
                                119_1 70 years, female 51.8
                                291_1 76 years, male 51.6
                                324_1 76 years, male 50.4
                                42_1 85 years, male 50.2
                                35_1 74 years, female 50.0
                                18_1 88 years, male 49.6
                                321_1 62 years, female 49.1
                                109_1 81 years, female 48.9
                                316_1 62 years, male 48.8
                                2_1 77 years, female 48.7
                                318_1 68 years, male 48.6
                                243_1 75 years, male 48.3
                                377_1 82 years, female 48.1
                                480_1 63 years, male 48.1
                                9_1 66 years, female 47.7
                                229_1 69 years, female 47.4
                                355_1 70 years, female 47.4
                                292_1 71 years, male 46.7
                                319_1 81 years, male 46.3
                                376_1 75 years, female 46.1
                                139_1 64 years, female 45.5
                                356_1 87 years, female 45.2
                                335_1 73 years, female 45.1
                                286_1 68 years, female 44.9
                                405_1 91 years, male 44.1
                                406_1 79 years, male 43.7
                                425_1 59 years, female 43.6
                                503_1 68 years, male 43.5
                                499_1 55 years, female 43.3
                                320_1 89 years, female 43.1
                                404_1 82 years, female 43.0
                                254_1 77 years, female 42.1
                                153_1 70 years, female 41.9
                                288_1 66 years, female 41.9
                                266_1 85 years, male 41.4
                                189_1 76 years, male 41.3
                                468_1 89 years, male 41.0
                                142_1 61 years, female 40.7
                                526_1 61 years, male 39.7
                                126_1 63 years, male 39.6
                                251_1 78 years, male 39.0
                                518_1 75 years, female 38.8
                                117_1 61 years, male 38.3
                                246_1 77 years, male 38.2
                                163_1 78 years, male 38.1
                                313_1 79 years, female 37.8
                                293_1 68 years, female 36.5
                                32_1 67 years, male 36.4
                                217_1 76 years, male 35.2
                                501_1 88 years, male 35.1
                                43_1 64 years, female 34.9
                                81_1 67 years, male 34.5
                                162_1 79 years, female 34.2
                                495_1 57 years, female 33.5
                                89_1 63 years, male 32.7
                                517_1 88 years, male 24.6
                                466_1 57 years, female 23.9
                                415_1 77 years, female 22.8
                                149_1 88 years, male 20.1
                                414_1 84 years, female 18.8
                                413_1 59 years, female 15.1
                                491_1 89 years, female 14.7
                                490_1 67 years, female 11.9
                                Show allShow less

                                RETINA - FANTOM5 CAGEi

                                RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                Read more
                                Max Scaled Tags Per Million 201.7
                                FANTOM5 sample id Sample description Scaled Tags Per Million
                                Retina
                                Scaled Tags Per Million: 201.7
                                FF:10030-101E3 24-65 years, mixed 201.7

                                RETINA - Pig RNA-seqi

                                RNA-seq data obtained from pig brain is reported as nTPM .

                                Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                Read more
                                Average nTPM 19.5
                                Pig sample Sample description nTPM
                                18.619.420.318.121.302468101214161820
                                18.619.420.318.121.302468101214161820
                                Retina
                                nTPM: 19.6
                                Samples: 4

                                Max nTPM: 21.3
                                Min nTPM: 18.1
                                Sample A Female 21.3
                                Sample B Female 18.8
                                Sample C Male 20.0
                                Sample D Male 18.1

                                RETINA - Mouse RNA-seqi

                                RNA-seq data obtained from mouse brain is reported as nTPM .

                                Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                Read more
                                Average nTPM 96.6
                                Mouse sample Sample description nTPM
                                94.7100.1102.098.4102.70102030405060708090100
                                94.7100.1102.098.4102.70102030405060708090100
                                Retina
                                nTPM: 96.6
                                Samples: 4

                                Max nTPM: 102.7
                                Min nTPM: 83.7
                                Sample A Male 101.7
                                Sample B Male 83.7
                                Sample C Female 102.7
                                Sample D Female 98.4

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