HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.8 nTPM
HPA:21.8 nTPM
GTEx:15.5 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:6.5 nTPM
Mouse:5.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001935Antibody HPA003911
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
2529 Female, age 94, left hemisphere 20.3
1911 Female, age 85, right hemisphere 20.2
2621 Female, age 67, right hemisphere 17.4
2148 Female, age 91, left hemisphere 16.4
1855 Male, age 76, left hemisphere 14.5
1898 Male, age 80, left hemisphere 13.3
Dentate gyrus
nTPM: 16.7
2530 Female, age 94, left hemisphere 19.8
2010 Male, age 76, both hemispheres 18.8
2528 Male, age 74, both hemispheres 17.2
2246 Female, age 85, both hemispheres 16.5
2531 Female, age 67, both hemispheres 14.1
1927 Female, age 91, both hemispheres 13.9
Entorhinal gyrus
nTPM: 19.9
2117 Female, age 91, right hemisphere 25.4
2686 Male, age 75, right hemisphere 21.6
2613 Female, age 94, left hemisphere 21.4
2764 Male, age 80, right hemisphere 20.5
1787 Male, age 76, left hemisphere 15.5
1938 Female, age 85, left hemisphere 15.1
Hippocampus, CA1
nTPM: 15.6
2082 Female, age 91, right hemisphere 19.8
2527 Male, age 74, both hemispheres 17.2
1873 Female, age 85, both hemispheres 15.2
2749 Male, age 80, left hemisphere 13.5
2045 Male, age 76, both hemispheres 12.5
Hippocampus, CA2
nTPM: 17.7
1940 Female, age 85, left hemisphere 19.1
1963 Male, age 80, left hemisphere 19.1
2437 Female, age 94, left hemisphere 18.6
2113 Female, age 91, right hemisphere 18.4
2249 Male, age 74, both hemispheres 17.9
1892 Male, age 76, both hemispheres 13.4
Hippocampus, CA3
nTPM: 16.8
2436 Male, age 74, both hemispheres 23.8
1891 Female, age 85, both hemispheres 21.7
1867 Male, age 76, both hemispheres 16.8
2861 Female, age 67, both hemispheres 13.0
2137 Male, age 80, left hemisphere 12.8
2620 Female, age 94, left hemisphere 12.5
Parahippocampal cortex
nTPM: 16.9
2692 Male, age 74, both hemispheres 20.7
1990 Female, age 91, right hemisphere 20.6
2018 Male, age 76, both hemispheres 19.9
2532 Female, age 72, left hemisphere 17.5
2622 Female, age 67, right hemisphere 16.3
1933 Female, age 85, both hemispheres 15.4
2245 Female, age 91, both hemispheres 15.4
2693 Female, age 94, both hemispheres 14.8
1850 Male, age 80, both hemispheres 14.3
2250 Female, age 67, right hemisphere 13.6
Perirhinal gyrus
nTPM: 13.3
2521 Female, age 94, right hemisphere 14.1
2848 Male, age 76, right hemisphere 13.6
1847 Female, age 91, left hemisphere 13.3
1794 Male, age 80, right hemisphere 12.8
1841 Female, age 85, right hemisphere 12.5
Subiculum
nTPM: 21.8
2042 Male, age 76, both hemispheres 26.8
1901 Male, age 80, both hemispheres 23.9
2438 Female, age 94, left hemisphere 22.9
2619 Male, age 74, both hemispheres 19.8
2729 Female, age 91, right hemisphere 19.6
1977 Female, age 85, both hemispheres 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 58.5
Min nTPM: 3.3
Std nTPM: 7.5
Median nTPM: 14.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 58.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 38.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 34.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 32.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 31.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 28.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 28.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 27.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.7
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 7.2
Min nTPM: 4.6
Sample A Female 4.6
Sample B Female 5.9
Sample C Male 5.5
Sample D Male 7.2
Entorhinal cortex
nTPM: 6.5
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.3
Sample A Female 7.4
Sample B Female 6.1
Sample C Male 5.3
Sample D Male 7.1
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 4.5
Min nTPM: 4.1
Sample A Female 4.4
Sample B Female 4.3
Sample C Male 4.5
Sample D Male 4.1
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 5.9
Sample C Male 5.1
Sample D Male 6.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Male 4.2
Sample B Male 3.5
Sample C Female 3.8
Sample D Female 2.6
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 7.2
Min nTPM: 3.4
Sample A Male 3.4
Sample B Male 4.6
Sample C Female 6.2
Sample D Female 7.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69817193 Antisense, RP_050510_02_G11, Mouse strain C57BL/6J (56 days, male) 0.1

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