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RPL27A
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  • RPL27A
TISSUE PRIMARY DATA THALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1138.3 nTPM
HPA:1138.3 nTPM
FANTOM5:38.2 Scaled Tags Per Million
Pig:238.8 nTPM
Mouse:177.9 nTPM
Allen mouse:9.5 Expression energy

THALAMUS - HPA Brain RNA-seq
Max nTPM 1138.3
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 1120.8
2396 Male, age 61, right hemisphere 1198.3
2497 Male, age 66, unknown 1089.8
2032 Female, age 42, unknown 1074.3
Centromedial thalamic nucleus
nTPM: 1086.1
2279 Female, age 85, left hemisphere 1096.6
2401 Male, age 76, right hemisphere 1075.6
Habenula
nTPM: 1074.0
1957 Male, age 80, both hemispheres 1090.7
2203 Male, age 61, left hemisphere 1075.8
2252 Male, age 62, unknown 1067.0
2276 Male, age 66, unknown 1062.4
Lateral geniculate body
nTPM: 1092.3
2575 Female, age 94, right hemisphere 1128.9
2857 Male, age 74, right hemisphere 1102.9
2659 Male, age 66, unknown 1102.1
2035 Female, age 72, unknown 1088.7
1953 Male, age 62, unknown 1085.7
2841 Male, age 80, both hemispheres 1085.3
2399 Male, age 61, left hemisphere 1078.4
2106 Female, age 67, right hemisphere 1066.7
Lateral thalamic nuclei
nTPM: 1096.2
2573 Female, age 94, left hemisphere 1110.6
2765 Female, age 67, both hemispheres 1106.1
2661 Female, age 72, unknown 1099.3
2577 Male, age 74, both hemispheres 1098.4
1903 Male, age 76, left hemisphere 1066.8
Medial dorsal thalamic nucleus
nTPM: 1095.6
2572 Female, age 94, right hemisphere 1176.2
1971 Male, age 61, right hemisphere 1121.1
2039 Female, age 72, unknown 1112.4
1930 Female, age 42, unknown 1095.2
1810 Male, age 48, unknown 1093.6
1859 Male, age 76, both hemispheres 1086.1
2402 Female, age 67, both hemispheres 1084.6
2026 Male, age 62, unknown 1084.3
2498 Male, age 66, unknown 1083.7
2576 Male, age 74, both hemispheres 1083.6
2492 Male, age 75, right hemisphere 1080.2
2660 Female, age 72, unknown 1078.2
2283 Male, age 80, right hemisphere 1064.1
Medial geniculate body
nTPM: 1099.1
2571 Male, age 75, right hemisphere 1129.4
2049 Male, age 76, both hemispheres 1117.2
2650 Female, age 94, left hemisphere 1109.1
2207 Male, age 80, right hemisphere 1093.3
2657 Male, age 74, right hemisphere 1087.9
1811 Female, age 42, unknown 1080.4
2217 Female, age 72, unknown 1076.1
Nucleus reuniens
nTPM: 1102.4
2210 Female, age 85, left hemisphere 1112.0
2205 Male, age 80, left hemisphere 1100.2
2212 Female, age 67, left hemisphere 1095.0
Nucleus rhomboideus
nTPM: 1094.4
2213 Female, age 67, left hemisphere 1111.5
2280 Female, age 85, left hemisphere 1092.6
2206 Male, age 80, both hemispheres 1079.3
Posterior thalamic nucleus
nTPM: 1138.3
2649 Female, age 94, both hemispheres 1290.0
2655 Male, age 74, right hemisphere 1110.9
2495 Female, age 67, right hemisphere 1077.9
2266 Male, age 76, right hemisphere 1074.3
Pulvinar
nTPM: 1082.3
2724 Male, age 74, right hemisphere 1098.0
2499 Male, age 66, unknown 1092.5
2582 Female, age 72, unknown 1090.2
1929 Male, age 48, unknown 1084.8
2496 Female, age 67, right hemisphere 1083.5
2398 Male, age 61, left hemisphere 1078.1
1972 Male, age 62, unknown 1078.0
2214 Male, age 76, right hemisphere 1078.0
1932 Male, age 80, right hemisphere 1077.5
1899 Female, age 42, unknown 1062.9
Subthalamic nucleus
nTPM: 1095.5
2124 Male, age 62, unknown 1116.3
2658 Male, age 74, both hemispheres 1112.1
2056 Female, age 72, unknown 1101.0
2779 Female, age 42, unknown 1093.3
2216 Male, age 48, unknown 1090.8
2282 Male, age 61, both hemispheres 1089.1
2275 Male, age 66, unknown 1086.8
2406 Female, age 72, unknown 1074.7
Ventral posterolateral thalamic nucleus
nTPM: 1081.2
2397 Male, age 61, right hemisphere 1106.0
2578 Male, age 74, both hemispheres 1097.3
2197 Male, age 80, both hemispheres 1083.8
2570 Male, age 75, right hemisphere 1082.7
2740 Male, age 76, right hemisphere 1067.3
2581 Female, age 72, unknown 1050.2
Ventral posteromedial thalamic nucleus
nTPM: 1082.2
2202 Male, age 61, left hemisphere 1097.8
2653 Male, age 74, both hemispheres 1090.0
2127 Male, age 76, right hemisphere 1081.7
2281 Male, age 75, right hemisphere 1075.6
2758 Male, age 80, both hemispheres 1066.1
Ventral thalamic nuclei
nTPM: 1093.9
2580 Male, age 66, unknown 1112.2
2291 Female, age 72, unknown 1110.4
1912 Female, age 42, unknown 1096.1
1845 Male, age 48, unknown 1093.6
1860 Male, age 76, both hemispheres 1093.6
2285 Male, age 62, unknown 1093.2
2652 Male, age 74, left hemisphere 1091.1
2204 Male, age 80, both hemispheres 1084.1
2858 Female, age 72, unknown 1070.8
Ventromedial nucleus
nTPM: 1101.1
1982 Female, age 72, unknown 1105.4
1822 Female, age 42, unknown 1096.7
Zona incerta
nTPM: 1094.5
2215 Male, age 66, unknown 1111.0
2822 Male, age 74, right hemisphere 1107.4
2403 Male, age 62, unknown 1100.5
2663 Female, age 72, unknown 1077.3
2208 Male, age 80, right hemisphere 1076.0

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 38.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 38.2
FF:10154-103A1 76 years, female 38.2

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 238.8
Pig sample Sample description nTPM
Thalamus
nTPM: 238.8
Samples: 4

Max nTPM: 262.7
Min nTPM: 185.0
Sample A Female 262.7
Sample B Female 185.0
Sample C Male 246.4
Sample D Male 261.0

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 177.9
Mouse sample Sample description nTPM
Thalamus
nTPM: 177.9
Samples: 4

Max nTPM: 194.9
Min nTPM: 160.5
Sample A Male 194.9
Sample B Male 164.7
Sample C Female 191.3
Sample D Female 160.5

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 9.5
69262228 Antisense, RP_050301_01_F08, Mouse strain C57BL/6J (56 days, male) 9.5

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.