HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:67.3 nTPM
HPA:67.3 nTPM
GTEx:100.6 nTPM
FANTOM5:239.0 Scaled Tags Per Million
Pig:195.9 nTPM
Mouse:114.5 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012928
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 67.3
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
2621 Female, age 67, right hemisphere 62.9
2148 Female, age 91, left hemisphere 42.5
1898 Male, age 80, left hemisphere 34.2
1855 Male, age 76, left hemisphere 33.2
1911 Female, age 85, right hemisphere 1.4
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 46.4
2531 Female, age 67, both hemispheres 78.8
1927 Female, age 91, both hemispheres 76.4
2530 Female, age 94, left hemisphere 38.6
2246 Female, age 85, both hemispheres 36.0
2528 Male, age 74, both hemispheres 27.2
2010 Male, age 76, both hemispheres 21.7
Entorhinal gyrus
nTPM: 42.5
2613 Female, age 94, left hemisphere 109.5
2764 Male, age 80, right hemisphere 49.1
1938 Female, age 85, left hemisphere 44.7
1787 Male, age 76, left hemisphere 30.6
2686 Male, age 75, right hemisphere 21.4
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 58.3
2749 Male, age 80, left hemisphere 92.5
2045 Male, age 76, both hemispheres 91.1
2527 Male, age 74, both hemispheres 40.4
2082 Female, age 91, right hemisphere 34.7
1873 Female, age 85, both hemispheres 32.7
Hippocampus, CA2
nTPM: 22.1
1892 Male, age 76, both hemispheres 46.4
2113 Female, age 91, right hemisphere 24.0
1963 Male, age 80, left hemisphere 22.1
2437 Female, age 94, left hemisphere 16.3
2249 Male, age 74, both hemispheres 12.7
1940 Female, age 85, left hemisphere 10.9
Hippocampus, CA3
nTPM: 52.2
2620 Female, age 94, left hemisphere 114.5
2861 Female, age 67, both hemispheres 83.3
2137 Male, age 80, left hemisphere 73.8
1867 Male, age 76, both hemispheres 21.0
2436 Male, age 74, both hemispheres 20.8
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 38.8
2245 Female, age 91, both hemispheres 73.6
2250 Female, age 67, right hemisphere 60.2
2693 Female, age 94, both hemispheres 60.1
1850 Male, age 80, both hemispheres 42.6
2622 Female, age 67, right hemisphere 42.6
1990 Female, age 91, right hemisphere 39.1
1933 Female, age 85, both hemispheres 36.3
2692 Male, age 74, both hemispheres 17.6
2018 Male, age 76, both hemispheres 11.8
2532 Female, age 72, left hemisphere 4.1
Perirhinal gyrus
nTPM: 67.3
1847 Female, age 91, left hemisphere 104.0
2521 Female, age 94, right hemisphere 73.0
1794 Male, age 80, right hemisphere 61.2
2848 Male, age 76, right hemisphere 54.2
1841 Female, age 85, right hemisphere 44.1
Subiculum
nTPM: 8.3
1977 Female, age 85, both hemispheres 27.4
1901 Male, age 80, both hemispheres 13.6
2619 Male, age 74, both hemispheres 8.1
2438 Female, age 94, left hemisphere 1.0
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.6
Samples: 197

Max nTPM: 291.7
Min nTPM: 1.0
Std nTPM: 69.5
Median nTPM: 91.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 291.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 266.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 265.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 262.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 255.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 252.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 250.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 242.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 242.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 238.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 230.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 239.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 239.0
FF:10169-103B7 60 years, female 344.2
FF:10153-102I9 76 years, female 133.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 195.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 195.9
Samples: 4

Max nTPM: 261.2
Min nTPM: 129.1
Sample A Female 261.2
Sample B Female 248.9
Sample C Male 129.1
Sample D Male 144.4
Entorhinal cortex
nTPM: 126.3
Samples: 4

Max nTPM: 143.0
Min nTPM: 110.4
Sample A Female 143.0
Sample B Female 112.6
Sample C Male 139.1
Sample D Male 110.4
Subiculum
nTPM: 125.1
Samples: 4

Max nTPM: 155.6
Min nTPM: 105.8
Sample A Female 155.6
Sample B Female 108.3
Sample C Male 130.5
Sample D Male 105.8
Ventral hippocampus
nTPM: 171.1
Samples: 4

Max nTPM: 254.4
Min nTPM: 96.4
Sample A Female 147.6
Sample B Female 96.4
Sample C Male 185.8
Sample D Male 254.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.5
Samples: 4

Max nTPM: 152.8
Min nTPM: 95.7
Sample A Male 98.5
Sample B Male 95.7
Sample C Female 111.0
Sample D Female 152.8
Hippocampal formation
nTPM: 90.5
Samples: 4

Max nTPM: 96.2
Min nTPM: 86.1
Sample A Male 88.3
Sample B Male 91.3
Sample C Female 86.1
Sample D Female 96.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
70305514 Antisense, RP_050609_04_D06, Mouse strain C57BL/6J (56 days, male) 15.4
73930834 Antisense, RP_051214_04_C09, Mouse strain C57BL/6J (56 days, male) 14.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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