HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.5 nTPM
HPA:13.5 nTPM
GTEx:10.8 nTPM
FANTOM5:37.4 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:38.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014157
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1898 Male, age 80, left hemisphere 13.9
1911 Female, age 85, right hemisphere 11.8
1855 Male, age 76, left hemisphere 11.6
2621 Female, age 67, right hemisphere 10.6
2148 Female, age 91, left hemisphere 10.4
2529 Female, age 94, left hemisphere 9.6
Dentate gyrus
nTPM: 11.4
1927 Female, age 91, both hemispheres 15.4
2246 Female, age 85, both hemispheres 11.3
2010 Male, age 76, both hemispheres 10.6
2528 Male, age 74, both hemispheres 10.6
2530 Female, age 94, left hemisphere 10.1
2531 Female, age 67, both hemispheres 10.1
Entorhinal gyrus
nTPM: 10.0
1938 Female, age 85, left hemisphere 13.7
2764 Male, age 80, right hemisphere 10.1
2613 Female, age 94, left hemisphere 9.5
2117 Female, age 91, right hemisphere 9.3
1787 Male, age 76, left hemisphere 8.9
2686 Male, age 75, right hemisphere 8.6
Hippocampus, CA1
nTPM: 12.4
2749 Male, age 80, left hemisphere 14.6
1873 Female, age 85, both hemispheres 12.8
2045 Male, age 76, both hemispheres 12.8
2527 Male, age 74, both hemispheres 11.0
2082 Female, age 91, right hemisphere 10.7
Hippocampus, CA2
nTPM: 11.2
1892 Male, age 76, both hemispheres 13.7
2249 Male, age 74, both hemispheres 12.1
1963 Male, age 80, left hemisphere 10.9
1940 Female, age 85, left hemisphere 10.4
2113 Female, age 91, right hemisphere 10.0
2437 Female, age 94, left hemisphere 10.0
Hippocampus, CA3
nTPM: 12.1
2137 Male, age 80, left hemisphere 15.9
1867 Male, age 76, both hemispheres 13.7
2436 Male, age 74, both hemispheres 11.7
1891 Female, age 85, both hemispheres 11.4
2620 Female, age 94, left hemisphere 10.6
2861 Female, age 67, both hemispheres 9.5
Parahippocampal cortex
nTPM: 11.3
1850 Male, age 80, both hemispheres 13.3
2693 Female, age 94, both hemispheres 13.3
2250 Female, age 67, right hemisphere 12.4
1933 Female, age 85, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.5
2245 Female, age 91, both hemispheres 11.5
2532 Female, age 72, left hemisphere 10.8
2018 Male, age 76, both hemispheres 9.6
2622 Female, age 67, right hemisphere 9.5
2692 Male, age 74, both hemispheres 9.1
Perirhinal gyrus
nTPM: 13.5
1841 Female, age 85, right hemisphere 15.1
2521 Female, age 94, right hemisphere 13.7
1794 Male, age 80, right hemisphere 13.3
1847 Female, age 91, left hemisphere 12.9
2848 Male, age 76, right hemisphere 12.4
Subiculum
nTPM: 9.9
1901 Male, age 80, both hemispheres 11.8
2729 Female, age 91, right hemisphere 10.7
1977 Female, age 85, both hemispheres 10.3
2042 Male, age 76, both hemispheres 8.9
2438 Female, age 94, left hemisphere 8.9
2619 Male, age 74, both hemispheres 8.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.8
Samples: 197

Max nTPM: 20.1
Min nTPM: 6.2
Std nTPM: 2.3
Median nTPM: 10.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 17.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 16.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 16.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 16.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 16.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 16.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 16.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 16.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 15.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 15.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.4
FF:10169-103B7 60 years, female 53.3
FF:10153-102I9 76 years, female 21.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 28.9
Min nTPM: 21.9
Sample A Female 28.9
Sample B Female 22.2
Sample C Male 22.9
Sample D Male 21.9
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 21.9
Min nTPM: 20.4
Sample A Female 21.9
Sample B Female 20.7
Sample C Male 21.2
Sample D Male 20.4
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 26.1
Min nTPM: 17.4
Sample A Female 26.1
Sample B Female 17.4
Sample C Male 22.1
Sample D Male 22.2
Ventral hippocampus
nTPM: 22.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 17.4
Sample A Female 27.8
Sample B Female 17.4
Sample C Male 20.4
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.2
Samples: 4

Max nTPM: 41.2
Min nTPM: 36.3
Sample A Male 37.0
Sample B Male 41.2
Sample C Female 38.2
Sample D Female 36.3
Hippocampal formation
nTPM: 36.0
Samples: 4

Max nTPM: 39.7
Min nTPM: 33.9
Sample A Male 39.7
Sample B Male 35.8
Sample C Female 34.4
Sample D Female 33.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69028360 Antisense, RP_050316_01_B07, Mouse strain C57BL/6J (56 days, male) 0.6

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