HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:147.4 nTPM
HPA:147.4 nTPM
GTEx:111.9 nTPM
FANTOM5:174.0 Scaled Tags Per Million
Mouse:87.0 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 147.4
Sample id Sample description nTPM
Hippocampus
nTPM: 125.9
1855 Male, age 76, left hemisphere 134.3
1898 Male, age 80, left hemisphere 132.7
2148 Female, age 91, left hemisphere 128.1
2621 Female, age 67, right hemisphere 127.1
2529 Female, age 94, left hemisphere 120.4
1911 Female, age 85, right hemisphere 112.9
Dentate gyrus
nTPM: 133.2
2246 Female, age 85, both hemispheres 141.4
1927 Female, age 91, both hemispheres 140.7
2531 Female, age 67, both hemispheres 138.1
2010 Male, age 76, both hemispheres 129.7
2530 Female, age 94, left hemisphere 124.8
2528 Male, age 74, both hemispheres 124.2
Entorhinal gyrus
nTPM: 135.1
2613 Female, age 94, left hemisphere 152.8
2764 Male, age 80, right hemisphere 140.9
1938 Female, age 85, left hemisphere 137.0
1787 Male, age 76, left hemisphere 132.2
2686 Male, age 75, right hemisphere 131.5
2117 Female, age 91, right hemisphere 115.9
Hippocampus, CA1
nTPM: 144.6
2749 Male, age 80, left hemisphere 172.0
2082 Female, age 91, right hemisphere 151.0
2045 Male, age 76, both hemispheres 149.7
1873 Female, age 85, both hemispheres 128.7
2527 Male, age 74, both hemispheres 121.7
Hippocampus, CA2
nTPM: 126.7
1892 Male, age 76, both hemispheres 143.0
1963 Male, age 80, left hemisphere 131.0
2113 Female, age 91, right hemisphere 129.9
2437 Female, age 94, left hemisphere 120.9
2249 Male, age 74, both hemispheres 120.4
1940 Female, age 85, left hemisphere 115.0
Hippocampus, CA3
nTPM: 144.6
2137 Male, age 80, left hemisphere 169.9
2620 Female, age 94, left hemisphere 156.4
2861 Female, age 67, both hemispheres 146.1
2436 Male, age 74, both hemispheres 141.8
1867 Male, age 76, both hemispheres 139.1
1891 Female, age 85, both hemispheres 114.1
Parahippocampal cortex
nTPM: 131.5
2693 Female, age 94, both hemispheres 140.5
1850 Male, age 80, both hemispheres 138.3
2245 Female, age 91, both hemispheres 134.3
1933 Female, age 85, both hemispheres 132.2
2622 Female, age 67, right hemisphere 130.4
1990 Female, age 91, right hemisphere 130.1
2018 Male, age 76, both hemispheres 129.3
2532 Female, age 72, left hemisphere 128.4
2250 Female, age 67, right hemisphere 127.6
2692 Male, age 74, both hemispheres 123.8
Perirhinal gyrus
nTPM: 147.4
1847 Female, age 91, left hemisphere 158.8
2848 Male, age 76, right hemisphere 150.9
1794 Male, age 80, right hemisphere 148.7
2521 Female, age 94, right hemisphere 141.7
1841 Female, age 85, right hemisphere 136.8
Subiculum
nTPM: 123.8
1977 Female, age 85, both hemispheres 138.4
1901 Male, age 80, both hemispheres 127.7
2729 Female, age 91, right hemisphere 123.2
2619 Male, age 74, both hemispheres 120.1
2042 Male, age 76, both hemispheres 117.8
2438 Female, age 94, left hemisphere 115.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 111.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.9
Samples: 197

Max nTPM: 231.4
Min nTPM: 44.5
Std nTPM: 37.6
Median nTPM: 109.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 231.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 209.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 199.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 190.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 185.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 184.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 183.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 183.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 180.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 180.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 177.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 174.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 174.0
FF:10169-103B7 60 years, female 218.6
FF:10153-102I9 76 years, female 129.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.0
Samples: 4

Max nTPM: 97.9
Min nTPM: 77.4
Sample A Male 77.4
Sample B Male 79.5
Sample C Female 93.1
Sample D Female 97.9
Hippocampal formation
nTPM: 85.7
Samples: 4

Max nTPM: 93.4
Min nTPM: 78.7
Sample A Male 93.4
Sample B Male 88.7
Sample C Female 78.7
Sample D Female 81.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68637575 Antisense, RP_050126_01_B08, Mouse strain C57BL/6J (56 days, male) 6.3
71016617 Antisense, RP_050725_03_A07, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.