HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.2 nTPM
HPA:28.2 nTPM
GTEx:17.2 nTPM
FANTOM5:18.1 Scaled Tags Per Million
Pig:3.0 nTPM
Mouse:0.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.6
1911 Female, age 85, right hemisphere 27.9
2529 Female, age 94, left hemisphere 25.5
2148 Female, age 91, left hemisphere 25.2
2621 Female, age 67, right hemisphere 25.1
1898 Male, age 80, left hemisphere 25.0
1855 Male, age 76, left hemisphere 24.7
Dentate gyrus
nTPM: 26.1
2528 Male, age 74, both hemispheres 27.9
2010 Male, age 76, both hemispheres 27.8
2246 Female, age 85, both hemispheres 27.3
2530 Female, age 94, left hemisphere 25.6
2531 Female, age 67, both hemispheres 24.8
1927 Female, age 91, both hemispheres 23.4
Entorhinal gyrus
nTPM: 25.7
2117 Female, age 91, right hemisphere 29.1
2764 Male, age 80, right hemisphere 26.9
2686 Male, age 75, right hemisphere 25.0
1787 Male, age 76, left hemisphere 24.8
2613 Female, age 94, left hemisphere 24.6
1938 Female, age 85, left hemisphere 24.0
Hippocampus, CA1
nTPM: 25.8
2082 Female, age 91, right hemisphere 29.5
2527 Male, age 74, both hemispheres 27.4
1873 Female, age 85, both hemispheres 25.9
2749 Male, age 80, left hemisphere 23.5
2045 Male, age 76, both hemispheres 22.5
Hippocampus, CA2
nTPM: 26.5
2113 Female, age 91, right hemisphere 28.8
2249 Male, age 74, both hemispheres 28.6
1940 Female, age 85, left hemisphere 28.1
2437 Female, age 94, left hemisphere 25.7
1963 Male, age 80, left hemisphere 25.4
1892 Male, age 76, both hemispheres 22.5
Hippocampus, CA3
nTPM: 24.7
1891 Female, age 85, both hemispheres 28.7
2436 Male, age 74, both hemispheres 24.5
2137 Male, age 80, left hemisphere 24.4
1867 Male, age 76, both hemispheres 24.1
2620 Female, age 94, left hemisphere 23.5
2861 Female, age 67, both hemispheres 23.2
Parahippocampal cortex
nTPM: 25.2
2692 Male, age 74, both hemispheres 29.5
1990 Female, age 91, right hemisphere 27.5
2018 Male, age 76, both hemispheres 26.1
2532 Female, age 72, left hemisphere 24.8
1850 Male, age 80, both hemispheres 24.7
1933 Female, age 85, both hemispheres 24.1
2622 Female, age 67, right hemisphere 24.1
2245 Female, age 91, both hemispheres 23.7
2250 Female, age 67, right hemisphere 23.7
2693 Female, age 94, both hemispheres 23.6
Perirhinal gyrus
nTPM: 23.2
1794 Male, age 80, right hemisphere 23.6
1847 Female, age 91, left hemisphere 23.6
2521 Female, age 94, right hemisphere 23.6
2848 Male, age 76, right hemisphere 23.2
1841 Female, age 85, right hemisphere 22.3
Subiculum
nTPM: 28.2
2042 Male, age 76, both hemispheres 33.1
1901 Male, age 80, both hemispheres 29.5
2619 Male, age 74, both hemispheres 27.6
1977 Female, age 85, both hemispheres 26.8
2729 Female, age 91, right hemisphere 26.7
2438 Female, age 94, left hemisphere 25.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 101.0
Min nTPM: 2.0
Std nTPM: 17.5
Median nTPM: 10.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 101.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 96.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 91.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 85.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 75.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 64.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 62.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 57.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 56.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 53.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 49.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.1
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 12.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 4.2
Min nTPM: 1.5
Sample A Female 3.9
Sample B Female 2.2
Sample C Male 4.2
Sample D Male 1.5
Entorhinal cortex
nTPM: 0.8
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.4
Sample A Female 1.0
Sample B Female 0.4
Sample C Male 1.0
Sample D Male 0.9
Subiculum
nTPM: 1.1
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.7
Sample A Female 1.0
Sample B Female 0.8
Sample C Male 0.7
Sample D Male 1.7
Ventral hippocampus
nTPM: 2.6
Samples: 4

Max nTPM: 3.8
Min nTPM: 1.5
Sample A Female 3.8
Sample B Female 1.5
Sample C Male 2.8
Sample D Male 2.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.1
Sample D Female 0.0
Hippocampal formation
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Male 0.4
Sample B Male 0.2
Sample C Female 0.3
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74957887 Antisense, RP_060315_05_A02, Mouse strain C57BL/6J (56 days, male) 0.1
69981121 Antisense, RP_050512_04_F11, Mouse strain C57BL/6J (56 days, male) 0.1

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