HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:107.0 nTPM
HPA:107.0 nTPM
GTEx:156.9 nTPM
FANTOM5:182.0 Scaled Tags Per Million
Pig:112.5 nTPM
Mouse:222.8 nTPM
Allen mouse:25.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041114Antibody HPA063757
Glial cells Not detectedHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.0
Sample id Sample description nTPM
Hippocampus
nTPM: 96.0
1898 Male, age 80, left hemisphere 119.0
1855 Male, age 76, left hemisphere 106.4
2621 Female, age 67, right hemisphere 102.3
2148 Female, age 91, left hemisphere 100.0
1911 Female, age 85, right hemisphere 77.8
2529 Female, age 94, left hemisphere 70.3
Dentate gyrus
nTPM: 102.5
1927 Female, age 91, both hemispheres 121.7
2010 Male, age 76, both hemispheres 108.7
2531 Female, age 67, both hemispheres 107.8
2530 Female, age 94, left hemisphere 101.3
2246 Female, age 85, both hemispheres 90.2
2528 Male, age 74, both hemispheres 85.3
Entorhinal gyrus
nTPM: 90.6
2764 Male, age 80, right hemisphere 100.2
1938 Female, age 85, left hemisphere 97.7
1787 Male, age 76, left hemisphere 95.5
2613 Female, age 94, left hemisphere 94.2
2686 Male, age 75, right hemisphere 83.4
2117 Female, age 91, right hemisphere 72.8
Hippocampus, CA1
nTPM: 107.0
2749 Male, age 80, left hemisphere 127.0
2045 Male, age 76, both hemispheres 122.5
1873 Female, age 85, both hemispheres 109.7
2082 Female, age 91, right hemisphere 88.2
2527 Male, age 74, both hemispheres 87.5
Hippocampus, CA2
nTPM: 92.2
1892 Male, age 76, both hemispheres 116.9
1963 Male, age 80, left hemisphere 108.4
2437 Female, age 94, left hemisphere 92.6
1940 Female, age 85, left hemisphere 86.3
2113 Female, age 91, right hemisphere 76.2
2249 Male, age 74, both hemispheres 73.0
Hippocampus, CA3
nTPM: 106.3
2620 Female, age 94, left hemisphere 145.1
2137 Male, age 80, left hemisphere 114.8
2861 Female, age 67, both hemispheres 112.1
1867 Male, age 76, both hemispheres 101.2
1891 Female, age 85, both hemispheres 88.7
2436 Male, age 74, both hemispheres 76.2
Parahippocampal cortex
nTPM: 89.4
1850 Male, age 80, both hemispheres 110.4
1933 Female, age 85, both hemispheres 94.7
2532 Female, age 72, left hemisphere 94.4
1990 Female, age 91, right hemisphere 92.8
2245 Female, age 91, both hemispheres 89.8
2693 Female, age 94, both hemispheres 86.6
2622 Female, age 67, right hemisphere 85.6
2250 Female, age 67, right hemisphere 82.3
2018 Male, age 76, both hemispheres 79.1
2692 Male, age 74, both hemispheres 78.6
Perirhinal gyrus
nTPM: 106.6
1847 Female, age 91, left hemisphere 131.8
1794 Male, age 80, right hemisphere 114.2
2848 Male, age 76, right hemisphere 97.1
1841 Female, age 85, right hemisphere 96.4
2521 Female, age 94, right hemisphere 93.4
Subiculum
nTPM: 83.9
1977 Female, age 85, both hemispheres 95.4
1901 Male, age 80, both hemispheres 93.2
2438 Female, age 94, left hemisphere 82.2
2729 Female, age 91, right hemisphere 79.6
2619 Male, age 74, both hemispheres 78.6
2042 Male, age 76, both hemispheres 74.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 156.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 156.9
Samples: 197

Max nTPM: 397.8
Min nTPM: 27.1
Std nTPM: 74.0
Median nTPM: 151.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 397.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 350.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 340.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 323.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 312.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 309.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 305.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 293.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 291.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 286.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 273.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.0
FF:10169-103B7 60 years, female 222.8
FF:10153-102I9 76 years, female 141.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 112.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 82.0
Samples: 4

Max nTPM: 96.3
Min nTPM: 67.7
Sample A Female 96.3
Sample B Female 82.8
Sample C Male 81.3
Sample D Male 67.7
Entorhinal cortex
nTPM: 112.5
Samples: 4

Max nTPM: 117.8
Min nTPM: 108.2
Sample A Female 108.2
Sample B Female 113.6
Sample C Male 117.8
Sample D Male 110.3
Subiculum
nTPM: 102.4
Samples: 4

Max nTPM: 132.5
Min nTPM: 89.3
Sample A Female 132.5
Sample B Female 93.1
Sample C Male 94.7
Sample D Male 89.3
Ventral hippocampus
nTPM: 98.6
Samples: 4

Max nTPM: 134.0
Min nTPM: 69.6
Sample A Female 112.6
Sample B Female 78.3
Sample C Male 134.0
Sample D Male 69.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 222.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 222.8
Samples: 4

Max nTPM: 246.0
Min nTPM: 206.1
Sample A Male 206.1
Sample B Male 220.9
Sample C Female 218.2
Sample D Female 246.0
Hippocampal formation
nTPM: 193.5
Samples: 4

Max nTPM: 202.8
Min nTPM: 182.6
Sample A Male 202.8
Sample B Male 182.6
Sample C Female 197.0
Sample D Female 191.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.3
67815971 Antisense, RP_040920_02_E04, Mouse strain C57BL/6J (56 days, male) 25.3

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