HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:232.0 nTPM
HPA:232.0 nTPM
GTEx:177.5 nTPM
FANTOM5:314.5 Scaled Tags Per Million
Pig:422.8 nTPM
Mouse:530.1 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007925Antibody HPA011212Antibody CAB003759
Glial cells Not detectedMediumHigh
Neuronal cells HighHighHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 232.0
Sample id Sample description nTPM
Hippocampus
nTPM: 193.2
1898 Male, age 80, left hemisphere 243.5
1855 Male, age 76, left hemisphere 212.4
2621 Female, age 67, right hemisphere 198.0
1911 Female, age 85, right hemisphere 179.2
2148 Female, age 91, left hemisphere 166.5
2529 Female, age 94, left hemisphere 159.4
Dentate gyrus
nTPM: 200.4
1927 Female, age 91, both hemispheres 239.1
2010 Male, age 76, both hemispheres 234.2
2530 Female, age 94, left hemisphere 191.8
2246 Female, age 85, both hemispheres 191.6
2528 Male, age 74, both hemispheres 180.6
2531 Female, age 67, both hemispheres 165.3
Entorhinal gyrus
nTPM: 192.3
1938 Female, age 85, left hemisphere 225.6
2764 Male, age 80, right hemisphere 209.7
2613 Female, age 94, left hemisphere 202.2
1787 Male, age 76, left hemisphere 197.2
2117 Female, age 91, right hemisphere 165.1
2686 Male, age 75, right hemisphere 154.1
Hippocampus, CA1
nTPM: 230.1
2749 Male, age 80, left hemisphere 357.5
1873 Female, age 85, both hemispheres 223.1
2045 Male, age 76, both hemispheres 201.2
2527 Male, age 74, both hemispheres 195.9
2082 Female, age 91, right hemisphere 172.8
Hippocampus, CA2
nTPM: 207.8
1892 Male, age 76, both hemispheres 267.4
1963 Male, age 80, left hemisphere 258.0
2249 Male, age 74, both hemispheres 199.3
1940 Female, age 85, left hemisphere 174.4
2437 Female, age 94, left hemisphere 174.3
2113 Female, age 91, right hemisphere 173.4
Hippocampus, CA3
nTPM: 205.0
2137 Male, age 80, left hemisphere 303.0
1867 Male, age 76, both hemispheres 219.5
2436 Male, age 74, both hemispheres 198.8
1891 Female, age 85, both hemispheres 175.2
2620 Female, age 94, left hemisphere 168.6
2861 Female, age 67, both hemispheres 164.9
Parahippocampal cortex
nTPM: 199.1
1850 Male, age 80, both hemispheres 229.0
2245 Female, age 91, both hemispheres 219.8
2250 Female, age 67, right hemisphere 218.8
1933 Female, age 85, both hemispheres 216.2
1990 Female, age 91, right hemisphere 205.2
2693 Female, age 94, both hemispheres 202.1
2532 Female, age 72, left hemisphere 197.7
2018 Male, age 76, both hemispheres 188.4
2622 Female, age 67, right hemisphere 159.2
2692 Male, age 74, both hemispheres 154.1
Perirhinal gyrus
nTPM: 232.0
1847 Female, age 91, left hemisphere 247.2
2521 Female, age 94, right hemisphere 233.8
1794 Male, age 80, right hemisphere 231.3
1841 Female, age 85, right hemisphere 227.5
2848 Male, age 76, right hemisphere 220.3
Subiculum
nTPM: 180.1
1901 Male, age 80, both hemispheres 209.8
1977 Female, age 85, both hemispheres 205.8
2042 Male, age 76, both hemispheres 178.9
2438 Female, age 94, left hemisphere 169.6
2619 Male, age 74, both hemispheres 158.2
2729 Female, age 91, right hemisphere 158.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 177.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 177.5
Samples: 197

Max nTPM: 435.4
Min nTPM: 48.3
Std nTPM: 74.3
Median nTPM: 165.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 435.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 370.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 348.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 343.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 329.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 327.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 324.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 322.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 320.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 316.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 315.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 314.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 314.5
FF:10169-103B7 60 years, female 395.5
FF:10153-102I9 76 years, female 233.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 422.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 422.7
Samples: 4

Max nTPM: 535.0
Min nTPM: 339.5
Sample A Female 535.0
Sample B Female 445.3
Sample C Male 371.1
Sample D Male 339.5
Entorhinal cortex
nTPM: 348.6
Samples: 4

Max nTPM: 366.8
Min nTPM: 330.5
Sample A Female 362.5
Sample B Female 334.6
Sample C Male 366.8
Sample D Male 330.5
Subiculum
nTPM: 367.2
Samples: 4

Max nTPM: 447.4
Min nTPM: 330.3
Sample A Female 447.4
Sample B Female 339.7
Sample C Male 351.5
Sample D Male 330.3
Ventral hippocampus
nTPM: 376.0
Samples: 4

Max nTPM: 441.3
Min nTPM: 272.5
Sample A Female 397.9
Sample B Female 272.5
Sample C Male 392.2
Sample D Male 441.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 530.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 459.1
Samples: 4

Max nTPM: 488.1
Min nTPM: 416.6
Sample A Male 416.6
Sample B Male 453.9
Sample C Female 477.6
Sample D Female 488.1
Hippocampal formation
nTPM: 530.1
Samples: 4

Max nTPM: 567.5
Min nTPM: 488.7
Sample A Male 567.5
Sample B Male 529.1
Sample C Female 535.1
Sample D Female 488.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
70919836 Antisense, RP_050713_02_B06, Mouse strain C57BL/6J (56 days, male) 18.3
2738 Antisense, RP_Baylor_103195, Mouse strain C57BL/6J (56 days, male) 9.0
2737 Antisense, RP_Baylor_103195, Mouse strain C57BL/6J (56 days, male) 8.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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