HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.4 nTPM
HPA:11.4 nTPM
GTEx:27.9 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:32.5 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022251
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
2621 Female, age 67, right hemisphere 24.2
2148 Female, age 91, left hemisphere 9.0
2529 Female, age 94, left hemisphere 8.5
1911 Female, age 85, right hemisphere 7.0
1855 Male, age 76, left hemisphere 5.4
1898 Male, age 80, left hemisphere 4.6
Dentate gyrus
nTPM: 7.5
2530 Female, age 94, left hemisphere 13.4
2531 Female, age 67, both hemispheres 12.7
1927 Female, age 91, both hemispheres 12.4
2010 Male, age 76, both hemispheres 3.4
2246 Female, age 85, both hemispheres 2.1
2528 Male, age 74, both hemispheres 1.2
Entorhinal gyrus
nTPM: 11.4
2613 Female, age 94, left hemisphere 36.4
2686 Male, age 75, right hemisphere 13.5
2764 Male, age 80, right hemisphere 10.2
1938 Female, age 85, left hemisphere 5.5
1787 Male, age 76, left hemisphere 3.1
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 6.9
2749 Male, age 80, left hemisphere 17.3
1873 Female, age 85, both hemispheres 7.3
2527 Male, age 74, both hemispheres 6.5
2045 Male, age 76, both hemispheres 2.2
2082 Female, age 91, right hemisphere 1.3
Hippocampus, CA2
nTPM: 4.8
1963 Male, age 80, left hemisphere 11.3
2437 Female, age 94, left hemisphere 11.0
1892 Male, age 76, both hemispheres 6.3
2113 Female, age 91, right hemisphere 0.1
1940 Female, age 85, left hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 11.1
2861 Female, age 67, both hemispheres 30.2
2620 Female, age 94, left hemisphere 21.6
2137 Male, age 80, left hemisphere 13.1
1867 Male, age 76, both hemispheres 1.9
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 7.5
2622 Female, age 67, right hemisphere 23.2
2245 Female, age 91, both hemispheres 14.6
2693 Female, age 94, both hemispheres 12.9
2692 Male, age 74, both hemispheres 9.1
1933 Female, age 85, both hemispheres 3.7
2532 Female, age 72, left hemisphere 3.5
1850 Male, age 80, both hemispheres 3.2
2250 Female, age 67, right hemisphere 2.8
1990 Female, age 91, right hemisphere 1.6
2018 Male, age 76, both hemispheres 0.0
Perirhinal gyrus
nTPM: 5.6
2521 Female, age 94, right hemisphere 8.2
1847 Female, age 91, left hemisphere 7.6
1794 Male, age 80, right hemisphere 6.9
1841 Female, age 85, right hemisphere 3.2
2848 Male, age 76, right hemisphere 2.4
Subiculum
nTPM: 2.7
2438 Female, age 94, left hemisphere 8.6
2619 Male, age 74, both hemispheres 6.1
1901 Male, age 80, both hemispheres 2.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 70.2
Min nTPM: 3.5
Std nTPM: 15.5
Median nTPM: 27.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 67.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 67.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 63.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 63.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 62.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 60.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 60.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 57.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 57.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 39.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 30.0
Min nTPM: 21.5
Sample A Female 30.0
Sample B Female 25.9
Sample C Male 22.7
Sample D Male 21.5
Entorhinal cortex
nTPM: 26.9
Samples: 4

Max nTPM: 31.7
Min nTPM: 23.9
Sample A Female 26.2
Sample B Female 23.9
Sample C Male 31.7
Sample D Male 25.6
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 38.2
Min nTPM: 23.0
Sample A Female 38.2
Sample B Female 24.0
Sample C Male 27.9
Sample D Male 23.0
Ventral hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 35.1
Min nTPM: 21.0
Sample A Female 22.5
Sample B Female 21.0
Sample C Male 35.1
Sample D Male 24.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 34.7
Min nTPM: 30.2
Sample A Male 31.6
Sample B Male 34.7
Sample C Female 30.2
Sample D Female 33.4
Hippocampal formation
nTPM: 26.3
Samples: 4

Max nTPM: 29.5
Min nTPM: 23.0
Sample A Male 24.7
Sample B Male 27.9
Sample C Female 23.0
Sample D Female 29.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
69549614 Antisense, RP_050217_02_G03, Mouse strain C57BL/6J (56 days, male) 4.4

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