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TSC22D4
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  • TSC22D4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:596.1 nTPM
FANTOM5:380.7 Scaled Tags Per Million
Pig:91.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006757
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 596.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 596.1
Samples: 246

Max nTPM: 1471.8
Min nTPM: 102.9
Std nTPM: 268.4
Median nTPM: 551.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1471.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1453.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1352.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1351.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1338.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1295.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1286.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1245.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1202.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1196.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1109.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1108.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1103.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1084.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1066.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1043.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1040.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1032.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1031.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1023.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1013.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 996.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 985.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 968.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 958.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 955.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 946.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 945.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 927.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 926.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 916.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 910.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 902.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 891.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 889.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 878.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 872.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 869.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 867.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 855.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 854.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 839.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 834.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 832.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 832.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 826.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 826.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 816.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 811.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 803.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 803.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 800.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 798.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 796.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 787.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 785.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 784.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 764.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 762.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 761.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 756.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 753.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 752.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 740.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 736.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 732.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 728.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 728.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 725.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 721.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 720.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 712.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 709.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 707.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 706.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 706.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 705.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 705.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 700.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 693.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 690.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 690.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 683.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 680.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 678.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 671.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 670.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 667.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 653.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 651.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 650.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 649.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 647.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 644.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 644.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 643.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 642.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 638.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 634.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 630.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 630.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 629.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 628.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 625.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 625.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 616.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 614.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 605.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 587.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 586.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 582.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 575.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 574.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 573.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 571.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 570.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 570.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 566.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 566.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 557.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 553.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 553.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 553.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 549.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 546.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 546.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 544.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 532.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 530.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 517.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 504.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 504.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 497.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 492.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 491.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 490.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 490.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 485.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 484.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 482.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 481.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 478.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 472.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 471.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 470.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 468.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 467.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 466.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 466.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 464.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 463.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 461.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 459.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 459.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 458.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 458.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 458.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 456.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 454.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 453.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 453.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 447.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 446.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 443.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 441.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 441.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 440.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 436.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 435.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 435.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 433.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 430.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 429.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 426.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 423.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 423.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 419.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 416.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 412.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 411.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 406.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 400.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 399.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 398.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 394.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 392.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 387.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 386.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 383.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 373.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 372.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 371.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 370.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 370.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 366.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 361.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 360.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 357.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 353.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 349.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 349.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 345.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 340.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 339.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 336.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 335.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 335.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 330.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 329.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 327.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 325.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 316.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 314.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 314.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 307.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 303.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 302.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 300.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 299.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 299.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 297.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 296.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 295.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 294.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 291.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 286.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 284.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 275.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 275.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 272.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 270.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 270.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 266.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 263.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 254.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 254.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 253.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 253.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 238.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 232.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 232.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 229.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 182.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 166.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 103.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 102.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 380.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 380.7
FF:10164-103B2 76 years, female 380.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 91.8
Pig sample Sample description nTPM
Caudate
nTPM: 91.8
Samples: 4

Max nTPM: 103.7
Min nTPM: 73.9
Sample A Female 73.9
Sample B Female 103.4
Sample C Male 103.7
Sample D Male 86.2

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