HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:92.8 nTPM
HPA:92.8 nTPM
GTEx:115.7 nTPM
FANTOM5:951.2 Scaled Tags Per Million
Pig:276.0 nTPM
Mouse:221.3 nTPM
Allen mouse:16.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039063Antibody HPA039064
Glial cells LowNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.8
Sample id Sample description nTPM
Hippocampus
nTPM: 78.0
2621 Female, age 67, right hemisphere 141.2
1898 Male, age 80, left hemisphere 96.8
2148 Female, age 91, left hemisphere 89.3
1855 Male, age 76, left hemisphere 56.2
2529 Female, age 94, left hemisphere 43.9
1911 Female, age 85, right hemisphere 40.4
Dentate gyrus
nTPM: 65.9
1927 Female, age 91, both hemispheres 108.7
2530 Female, age 94, left hemisphere 88.0
2531 Female, age 67, both hemispheres 82.6
2246 Female, age 85, both hemispheres 59.5
2010 Male, age 76, both hemispheres 33.8
2528 Male, age 74, both hemispheres 23.1
Entorhinal gyrus
nTPM: 70.3
2613 Female, age 94, left hemisphere 130.8
2764 Male, age 80, right hemisphere 88.8
1938 Female, age 85, left hemisphere 80.8
2686 Male, age 75, right hemisphere 55.3
1787 Male, age 76, left hemisphere 49.8
2117 Female, age 91, right hemisphere 16.1
Hippocampus, CA1
nTPM: 92.8
2749 Male, age 80, left hemisphere 224.9
2527 Male, age 74, both hemispheres 88.2
1873 Female, age 85, both hemispheres 66.8
2082 Female, age 91, right hemisphere 50.0
2045 Male, age 76, both hemispheres 34.0
Hippocampus, CA2
nTPM: 73.4
1963 Male, age 80, left hemisphere 115.5
1892 Male, age 76, both hemispheres 110.7
2437 Female, age 94, left hemisphere 74.3
2113 Female, age 91, right hemisphere 56.8
2249 Male, age 74, both hemispheres 41.5
1940 Female, age 85, left hemisphere 41.4
Hippocampus, CA3
nTPM: 87.6
2137 Male, age 80, left hemisphere 203.1
2861 Female, age 67, both hemispheres 116.0
2620 Female, age 94, left hemisphere 108.5
1867 Male, age 76, both hemispheres 57.2
1891 Female, age 85, both hemispheres 25.1
2436 Male, age 74, both hemispheres 15.8
Parahippocampal cortex
nTPM: 73.4
2245 Female, age 91, both hemispheres 161.5
1850 Male, age 80, both hemispheres 95.2
2622 Female, age 67, right hemisphere 86.2
2532 Female, age 72, left hemisphere 82.2
2250 Female, age 67, right hemisphere 69.8
1933 Female, age 85, both hemispheres 68.8
1990 Female, age 91, right hemisphere 66.3
2693 Female, age 94, both hemispheres 53.5
2692 Male, age 74, both hemispheres 44.5
2018 Male, age 76, both hemispheres 6.2
Perirhinal gyrus
nTPM: 90.6
1847 Female, age 91, left hemisphere 147.1
1794 Male, age 80, right hemisphere 97.3
2521 Female, age 94, right hemisphere 90.3
1841 Female, age 85, right hemisphere 72.9
2848 Male, age 76, right hemisphere 45.5
Subiculum
nTPM: 44.8
2438 Female, age 94, left hemisphere 80.3
1901 Male, age 80, both hemispheres 80.2
1977 Female, age 85, both hemispheres 52.7
2619 Male, age 74, both hemispheres 38.9
2729 Female, age 91, right hemisphere 11.5
2042 Male, age 76, both hemispheres 5.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.7
Samples: 197

Max nTPM: 277.6
Min nTPM: 18.0
Std nTPM: 52.7
Median nTPM: 109.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 277.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 241.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 241.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 239.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 238.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 236.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 231.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 227.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 218.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 217.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 215.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 951.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 951.2
FF:10169-103B7 60 years, female 1229.4
FF:10153-102I9 76 years, female 673.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 276.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 253.1
Samples: 4

Max nTPM: 307.5
Min nTPM: 183.7
Sample A Female 307.5
Sample B Female 259.0
Sample C Male 262.3
Sample D Male 183.7
Entorhinal cortex
nTPM: 261.3
Samples: 4

Max nTPM: 302.2
Min nTPM: 235.8
Sample A Female 302.2
Sample B Female 251.9
Sample C Male 235.8
Sample D Male 255.4
Subiculum
nTPM: 234.6
Samples: 4

Max nTPM: 313.7
Min nTPM: 182.5
Sample A Female 313.7
Sample B Female 192.1
Sample C Male 250.2
Sample D Male 182.5
Ventral hippocampus
nTPM: 276.0
Samples: 4

Max nTPM: 352.4
Min nTPM: 177.9
Sample A Female 264.5
Sample B Female 177.9
Sample C Male 352.4
Sample D Male 309.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 221.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 221.3
Samples: 4

Max nTPM: 243.1
Min nTPM: 199.9
Sample A Male 237.3
Sample B Male 204.7
Sample C Female 199.9
Sample D Female 243.1
Hippocampal formation
nTPM: 179.6
Samples: 4

Max nTPM: 204.3
Min nTPM: 152.6
Sample A Male 152.6
Sample B Male 197.6
Sample C Female 204.3
Sample D Female 163.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.4
71570736 Antisense, RP_050505_01_H05, Mouse strain C57BL/6J (56 days, male) 17.5
76115734 Antisense, RP_060620_02_C02, Mouse strain C57BL/6J (56 days, male) 15.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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