HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.9 nTPM
HPA:50.9 nTPM
GTEx:57.7 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:99.7 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041794Antibody HPA046300
Glial cells HighNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.9
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
1898 Male, age 80, left hemisphere 50.0
2621 Female, age 67, right hemisphere 43.6
1911 Female, age 85, right hemisphere 43.2
1855 Male, age 76, left hemisphere 41.9
2148 Female, age 91, left hemisphere 40.5
2529 Female, age 94, left hemisphere 38.0
Dentate gyrus
nTPM: 43.0
2010 Male, age 76, both hemispheres 49.5
1927 Female, age 91, both hemispheres 48.2
2246 Female, age 85, both hemispheres 42.0
2528 Male, age 74, both hemispheres 41.3
2530 Female, age 94, left hemisphere 39.7
2531 Female, age 67, both hemispheres 37.4
Entorhinal gyrus
nTPM: 50.9
2613 Female, age 94, left hemisphere 60.7
1938 Female, age 85, left hemisphere 56.4
2764 Male, age 80, right hemisphere 49.3
1787 Male, age 76, left hemisphere 48.9
2686 Male, age 75, right hemisphere 45.8
2117 Female, age 91, right hemisphere 44.0
Hippocampus, CA1
nTPM: 46.6
2749 Male, age 80, left hemisphere 64.2
2527 Male, age 74, both hemispheres 47.5
1873 Female, age 85, both hemispheres 45.6
2082 Female, age 91, right hemisphere 40.3
2045 Male, age 76, both hemispheres 35.6
Hippocampus, CA2
nTPM: 45.2
1963 Male, age 80, left hemisphere 52.0
2249 Male, age 74, both hemispheres 49.1
1892 Male, age 76, both hemispheres 48.0
2113 Female, age 91, right hemisphere 43.7
1940 Female, age 85, left hemisphere 40.5
2437 Female, age 94, left hemisphere 38.1
Hippocampus, CA3
nTPM: 44.4
2137 Male, age 80, left hemisphere 56.4
1867 Male, age 76, both hemispheres 46.6
1891 Female, age 85, both hemispheres 45.1
2436 Male, age 74, both hemispheres 44.6
2861 Female, age 67, both hemispheres 39.0
2620 Female, age 94, left hemisphere 35.0
Parahippocampal cortex
nTPM: 45.6
1850 Male, age 80, both hemispheres 50.4
1933 Female, age 85, both hemispheres 48.1
1990 Female, age 91, right hemisphere 48.0
2693 Female, age 94, both hemispheres 46.1
2245 Female, age 91, both hemispheres 45.8
2692 Male, age 74, both hemispheres 45.8
2250 Female, age 67, right hemisphere 43.7
2622 Female, age 67, right hemisphere 43.3
2018 Male, age 76, both hemispheres 43.2
2532 Female, age 72, left hemisphere 41.6
Perirhinal gyrus
nTPM: 47.0
1847 Female, age 91, left hemisphere 56.3
1841 Female, age 85, right hemisphere 46.9
1794 Male, age 80, right hemisphere 46.5
2848 Male, age 76, right hemisphere 44.0
2521 Female, age 94, right hemisphere 41.4
Subiculum
nTPM: 45.1
1901 Male, age 80, both hemispheres 50.5
2619 Male, age 74, both hemispheres 46.8
1977 Female, age 85, both hemispheres 46.3
2042 Male, age 76, both hemispheres 46.1
2438 Female, age 94, left hemisphere 40.6
2729 Female, age 91, right hemisphere 40.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.7
Samples: 197

Max nTPM: 115.0
Min nTPM: 23.5
Std nTPM: 11.4
Median nTPM: 56.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 115.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 86.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 84.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 79.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 78.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 76.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 76.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 75.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 74.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 73.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.1
FF:10153-102I9 76 years, female 29.4
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 33.0
Min nTPM: 20.4
Sample A Female 33.0
Sample B Female 25.9
Sample C Male 28.5
Sample D Male 20.4
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 31.0
Min nTPM: 23.6
Sample A Female 26.7
Sample B Female 31.0
Sample C Male 26.8
Sample D Male 23.6
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 22.8
Sample A Female 32.3
Sample B Female 23.7
Sample C Male 23.9
Sample D Male 22.8
Ventral hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 26.4
Min nTPM: 20.5
Sample A Female 25.9
Sample B Female 20.5
Sample C Male 24.1
Sample D Male 26.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.6
Samples: 4

Max nTPM: 107.6
Min nTPM: 90.5
Sample A Male 101.6
Sample B Male 107.6
Sample C Female 98.8
Sample D Female 90.5
Hippocampal formation
nTPM: 89.9
Samples: 4

Max nTPM: 100.3
Min nTPM: 83.5
Sample A Male 100.3
Sample B Male 86.9
Sample C Female 83.5
Sample D Female 88.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
1355 Antisense, RP_040407_02_D10, Mouse strain C57BL/6J (56 days, male) 2.4
1356 Antisense, RP_040407_02_D10, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas project is funded
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