HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.9 nTPM
HPA:28.9 nTPM
GTEx:26.2 nTPM
FANTOM5:182.9 Scaled Tags Per Million
Pig:46.3 nTPM
Mouse:31.2 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019863
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 20.3
1898 Male, age 80, left hemisphere 28.8
1855 Male, age 76, left hemisphere 22.4
1911 Female, age 85, right hemisphere 19.0
2621 Female, age 67, right hemisphere 18.2
2529 Female, age 94, left hemisphere 18.0
2148 Female, age 91, left hemisphere 15.2
Dentate gyrus
nTPM: 20.9
1927 Female, age 91, both hemispheres 26.4
2010 Male, age 76, both hemispheres 24.1
2528 Male, age 74, both hemispheres 23.1
2246 Female, age 85, both hemispheres 19.8
2530 Female, age 94, left hemisphere 17.4
2531 Female, age 67, both hemispheres 14.4
Entorhinal gyrus
nTPM: 19.8
1938 Female, age 85, left hemisphere 25.3
2764 Male, age 80, right hemisphere 22.8
1787 Male, age 76, left hemisphere 21.4
2117 Female, age 91, right hemisphere 17.8
2613 Female, age 94, left hemisphere 16.8
2686 Male, age 75, right hemisphere 14.6
Hippocampus, CA1
nTPM: 23.7
2749 Male, age 80, left hemisphere 30.9
1873 Female, age 85, both hemispheres 26.1
2045 Male, age 76, both hemispheres 22.1
2527 Male, age 74, both hemispheres 22.1
2082 Female, age 91, right hemisphere 17.4
Hippocampus, CA2
nTPM: 20.6
1892 Male, age 76, both hemispheres 26.5
2249 Male, age 74, both hemispheres 24.5
1963 Male, age 80, left hemisphere 23.4
1940 Female, age 85, left hemisphere 17.9
2113 Female, age 91, right hemisphere 16.7
2437 Female, age 94, left hemisphere 14.7
Hippocampus, CA3
nTPM: 20.5
2137 Male, age 80, left hemisphere 27.0
1867 Male, age 76, both hemispheres 23.6
1891 Female, age 85, both hemispheres 20.2
2436 Male, age 74, both hemispheres 20.2
2620 Female, age 94, left hemisphere 18.4
2861 Female, age 67, both hemispheres 13.4
Parahippocampal cortex
nTPM: 21.0
1850 Male, age 80, both hemispheres 29.1
1933 Female, age 85, both hemispheres 23.9
1990 Female, age 91, right hemisphere 23.6
2018 Male, age 76, both hemispheres 21.9
2250 Female, age 67, right hemisphere 21.2
2693 Female, age 94, both hemispheres 21.2
2245 Female, age 91, both hemispheres 18.9
2532 Female, age 72, left hemisphere 18.2
2692 Male, age 74, both hemispheres 18.1
2622 Female, age 67, right hemisphere 13.8
Perirhinal gyrus
nTPM: 28.9
1847 Female, age 91, left hemisphere 33.4
1794 Male, age 80, right hemisphere 31.9
1841 Female, age 85, right hemisphere 29.9
2848 Male, age 76, right hemisphere 25.1
2521 Female, age 94, right hemisphere 24.0
Subiculum
nTPM: 19.1
1977 Female, age 85, both hemispheres 23.7
1901 Male, age 80, both hemispheres 22.0
2042 Male, age 76, both hemispheres 18.5
2729 Female, age 91, right hemisphere 17.8
2619 Male, age 74, both hemispheres 16.8
2438 Female, age 94, left hemisphere 15.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.2
Samples: 197

Max nTPM: 45.3
Min nTPM: 13.8
Std nTPM: 6.0
Median nTPM: 25.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 41.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 40.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 40.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 39.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 39.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 38.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 38.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 37.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 182.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 182.9
FF:10169-103B7 60 years, female 241.7
FF:10153-102I9 76 years, female 124.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.3
Samples: 4

Max nTPM: 53.6
Min nTPM: 42.3
Sample A Female 53.6
Sample B Female 44.7
Sample C Male 44.7
Sample D Male 42.3
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 45.3
Min nTPM: 37.7
Sample A Female 38.2
Sample B Female 45.3
Sample C Male 44.3
Sample D Male 37.7
Subiculum
nTPM: 42.6
Samples: 4

Max nTPM: 49.8
Min nTPM: 39.0
Sample A Female 49.8
Sample B Female 40.8
Sample C Male 40.8
Sample D Male 39.0
Ventral hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 43.7
Min nTPM: 41.1
Sample A Female 42.8
Sample B Female 41.7
Sample C Male 43.7
Sample D Male 41.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 32.5
Min nTPM: 27.7
Sample A Male 28.6
Sample B Male 28.1
Sample C Female 27.7
Sample D Female 32.5
Hippocampal formation
nTPM: 31.2
Samples: 4

Max nTPM: 34.8
Min nTPM: 26.3
Sample A Male 30.2
Sample B Male 34.8
Sample C Female 33.4
Sample D Female 26.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
2116 Antisense, RP_Baylor_103267, Mouse strain C57BL/6J (56 days, male) 1.2
2115 Antisense, RP_Baylor_103267, Mouse strain C57BL/6J (56 days, male) 0.8

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