COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:38.9 nTPM
HPA:26.8 nTPM
GTEx:38.9 nTPM
FANTOM5:230.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 26.8
overview
Male, age 54 		Colon sample 67
nTPM: 20.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 24.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 36.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 35
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 19.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 20.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 20.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 38.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 17.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 23.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 25.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 28.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 38.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 38.9
Samples: 373

Max nTPM: 100.7
Min nTPM: 17.8
Std nTPM: 11.6
Median nTPM: 36.6
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 100.7
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 88.5
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 86.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 78.9
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 76.8
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 72.6
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 72.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 71.4
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 69.9
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 68.7
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 66.7
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Colon - Transverse
Average nTPM: 38.5
Samples: 406

Max nTPM: 176.2
Min nTPM: 13.0
Std nTPM: 16.3
Median nTPM: 34.4
GTEX-14JIY-3326-SM-6871E 60-69 years, male 176.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 144.5
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 89.7
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 86.3
GTEX-1AMFI-1726-SM-7189L 50-59 years, female 85.6
GTEX-14PK6-1726-SM-6871J 70-79 years, female 84.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 83.0
GTEX-ZLWG-1726-SM-DNZZ2 50-59 years, female 82.2
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 82.0
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 82.0
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 80.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 230.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 230.0
FF:10014-101C5 62,83,84 years, mixed 230.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.