HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.9 nTPM
HPA:30.9 nTPM
GTEx:35.0 nTPM
FANTOM5:67.9 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:43.5 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021178Antibody HPA021230Antibody HPA021799Antibody CAB015421
Glial cells Not detectedLowNot detectedNot detected
Neuronal cells MediumHighLowMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
2529 Female, age 94, left hemisphere 30.7
2621 Female, age 67, right hemisphere 30.5
1898 Male, age 80, left hemisphere 29.8
2148 Female, age 91, left hemisphere 29.2
1855 Male, age 76, left hemisphere 29.1
1911 Female, age 85, right hemisphere 24.7
Dentate gyrus
nTPM: 29.2
2530 Female, age 94, left hemisphere 30.4
1927 Female, age 91, both hemispheres 30.1
2010 Male, age 76, both hemispheres 30.0
2528 Male, age 74, both hemispheres 29.4
2246 Female, age 85, both hemispheres 28.8
2531 Female, age 67, both hemispheres 26.6
Entorhinal gyrus
nTPM: 30.9
2613 Female, age 94, left hemisphere 34.4
2686 Male, age 75, right hemisphere 32.1
2764 Male, age 80, right hemisphere 31.9
1787 Male, age 76, left hemisphere 31.1
1938 Female, age 85, left hemisphere 28.1
2117 Female, age 91, right hemisphere 28.1
Hippocampus, CA1
nTPM: 30.7
2749 Male, age 80, left hemisphere 35.8
2527 Male, age 74, both hemispheres 31.3
2082 Female, age 91, right hemisphere 29.7
1873 Female, age 85, both hemispheres 28.9
2045 Male, age 76, both hemispheres 27.5
Hippocampus, CA2
nTPM: 29.9
1963 Male, age 80, left hemisphere 32.7
2249 Male, age 74, both hemispheres 31.2
1892 Male, age 76, both hemispheres 30.5
2437 Female, age 94, left hemisphere 30.1
2113 Female, age 91, right hemisphere 28.6
1940 Female, age 85, left hemisphere 26.0
Hippocampus, CA3
nTPM: 30.1
2436 Male, age 74, both hemispheres 35.3
2137 Male, age 80, left hemisphere 32.4
2620 Female, age 94, left hemisphere 30.1
2861 Female, age 67, both hemispheres 28.0
1867 Male, age 76, both hemispheres 27.8
1891 Female, age 85, both hemispheres 26.9
Parahippocampal cortex
nTPM: 30.2
1850 Male, age 80, both hemispheres 31.7
2693 Female, age 94, both hemispheres 31.4
2692 Male, age 74, both hemispheres 31.1
2622 Female, age 67, right hemisphere 30.6
1990 Female, age 91, right hemisphere 30.4
2250 Female, age 67, right hemisphere 30.3
2245 Female, age 91, both hemispheres 29.8
2532 Female, age 72, left hemisphere 29.3
2018 Male, age 76, both hemispheres 28.8
1933 Female, age 85, both hemispheres 28.4
Perirhinal gyrus
nTPM: 30.8
1847 Female, age 91, left hemisphere 32.5
2848 Male, age 76, right hemisphere 31.0
1794 Male, age 80, right hemisphere 30.8
1841 Female, age 85, right hemisphere 30.2
2521 Female, age 94, right hemisphere 29.8
Subiculum
nTPM: 28.9
2619 Male, age 74, both hemispheres 31.5
2438 Female, age 94, left hemisphere 30.5
2042 Male, age 76, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.2
1977 Female, age 85, both hemispheres 28.1
2729 Female, age 91, right hemisphere 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.0
Samples: 197

Max nTPM: 46.5
Min nTPM: 23.9
Std nTPM: 4.3
Median nTPM: 34.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 46.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 45.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 44.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 43.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 43.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 42.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 42.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 42.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 42.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.9
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 61.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.9
Sample A Female 19.6
Sample B Female 17.2
Sample C Male 17.7
Sample D Male 13.9
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 15.3
Sample A Female 16.5
Sample B Female 19.0
Sample C Male 17.7
Sample D Male 15.3
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 14.4
Sample A Female 22.6
Sample B Female 15.2
Sample C Male 16.8
Sample D Male 14.4
Ventral hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 14.1
Sample A Female 16.2
Sample B Female 14.1
Sample C Male 22.6
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 45.3
Min nTPM: 40.6
Sample A Male 43.1
Sample B Male 40.6
Sample C Female 43.8
Sample D Female 45.3
Hippocampal formation
nTPM: 43.5
Samples: 4

Max nTPM: 46.6
Min nTPM: 38.9
Sample A Male 38.9
Sample B Male 46.6
Sample C Female 46.6
Sample D Female 41.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
392913 Antisense, RP_040804_01_F11, Mouse strain C57BL/6J (56 days, male) 10.9

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