HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.8 nTPM
HPA:33.8 nTPM
GTEx:23.6 nTPM
FANTOM5:36.8 Scaled Tags Per Million
Pig:51.0 nTPM
Mouse:24.6 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065160
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.8
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
2621 Female, age 67, right hemisphere 33.0
2529 Female, age 94, left hemisphere 32.8
2148 Female, age 91, left hemisphere 32.5
1911 Female, age 85, right hemisphere 32.3
1898 Male, age 80, left hemisphere 32.2
1855 Male, age 76, left hemisphere 31.0
Dentate gyrus
nTPM: 31.3
2530 Female, age 94, left hemisphere 33.3
2528 Male, age 74, both hemispheres 32.0
2246 Female, age 85, both hemispheres 31.7
2531 Female, age 67, both hemispheres 31.0
1927 Female, age 91, both hemispheres 30.1
2010 Male, age 76, both hemispheres 29.9
Entorhinal gyrus
nTPM: 33.6
2686 Male, age 75, right hemisphere 35.4
2764 Male, age 80, right hemisphere 35.2
2117 Female, age 91, right hemisphere 34.5
2613 Female, age 94, left hemisphere 33.8
1787 Male, age 76, left hemisphere 32.0
1938 Female, age 85, left hemisphere 31.0
Hippocampus, CA1
nTPM: 30.8
1873 Female, age 85, both hemispheres 31.8
2082 Female, age 91, right hemisphere 31.7
2527 Male, age 74, both hemispheres 31.6
2749 Male, age 80, left hemisphere 30.8
2045 Male, age 76, both hemispheres 28.1
Hippocampus, CA2
nTPM: 31.8
2437 Female, age 94, left hemisphere 33.0
1963 Male, age 80, left hemisphere 32.5
2113 Female, age 91, right hemisphere 32.3
1892 Male, age 76, both hemispheres 31.4
2249 Male, age 74, both hemispheres 31.3
1940 Female, age 85, left hemisphere 30.3
Hippocampus, CA3
nTPM: 32.0
2620 Female, age 94, left hemisphere 34.3
1891 Female, age 85, both hemispheres 33.9
2861 Female, age 67, both hemispheres 33.2
1867 Male, age 76, both hemispheres 31.8
2137 Male, age 80, left hemisphere 29.8
2436 Male, age 74, both hemispheres 29.2
Parahippocampal cortex
nTPM: 32.7
2692 Male, age 74, both hemispheres 37.1
2622 Female, age 67, right hemisphere 34.3
2532 Female, age 72, left hemisphere 34.0
1850 Male, age 80, both hemispheres 33.1
1990 Female, age 91, right hemisphere 32.9
2693 Female, age 94, both hemispheres 32.3
2245 Female, age 91, both hemispheres 31.5
1933 Female, age 85, both hemispheres 31.2
2018 Male, age 76, both hemispheres 30.9
2250 Female, age 67, right hemisphere 30.0
Perirhinal gyrus
nTPM: 30.6
2848 Male, age 76, right hemisphere 31.2
1794 Male, age 80, right hemisphere 30.9
1841 Female, age 85, right hemisphere 30.5
1847 Female, age 91, left hemisphere 30.3
2521 Female, age 94, right hemisphere 30.1
Subiculum
nTPM: 33.8
2619 Male, age 74, both hemispheres 35.5
1901 Male, age 80, both hemispheres 34.8
2042 Male, age 76, both hemispheres 34.6
1977 Female, age 85, both hemispheres 33.1
2438 Female, age 94, left hemisphere 33.0
2729 Female, age 91, right hemisphere 31.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.6
Samples: 197

Max nTPM: 38.8
Min nTPM: 12.2
Std nTPM: 4.4
Median nTPM: 23.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 35.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 34.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 34.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 34.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 33.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 32.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 31.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 31.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.8
FF:10153-102I9 76 years, female 42.2
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.0
Samples: 4

Max nTPM: 64.2
Min nTPM: 33.8
Sample A Female 64.2
Sample B Female 50.2
Sample C Male 55.6
Sample D Male 33.8
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 50.5
Min nTPM: 41.4
Sample A Female 43.5
Sample B Female 43.5
Sample C Male 50.5
Sample D Male 41.4
Subiculum
nTPM: 45.6
Samples: 4

Max nTPM: 56.8
Min nTPM: 40.1
Sample A Female 56.8
Sample B Female 40.1
Sample C Male 44.5
Sample D Male 40.8
Ventral hippocampus
nTPM: 50.0
Samples: 4

Max nTPM: 61.7
Min nTPM: 36.4
Sample A Female 51.2
Sample B Female 36.4
Sample C Male 61.7
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 24.4
Min nTPM: 18.6
Sample A Male 22.2
Sample B Male 24.4
Sample C Female 23.8
Sample D Female 18.6
Hippocampal formation
nTPM: 24.6
Samples: 4

Max nTPM: 25.9
Min nTPM: 21.2
Sample A Male 25.9
Sample B Male 21.2
Sample C Female 25.3
Sample D Female 25.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
70429124 Antisense, RP_050614_01_A08, Mouse strain C57BL/6J (56 days, male) 6.1

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