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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:220.2 nTPM
FANTOM5:83.2 Scaled Tags Per Million
Pig:2.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021657
Glial cells Not detected
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 220.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 220.2
Samples: 246

Max nTPM: 799.2
Min nTPM: 12.1
Std nTPM: 137.8
Median nTPM: 189.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 799.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 649.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 628.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 586.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 562.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 547.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 524.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 522.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 520.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 518.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 513.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 499.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 493.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 485.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 478.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 464.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 460.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 460.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 456.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 446.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 443.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 442.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 423.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 423.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 419.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 415.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 412.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 411.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 408.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 402.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 388.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 381.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 377.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 376.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 375.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 374.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 371.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 370.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 369.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 367.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 366.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 363.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 358.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 356.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 348.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 348.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 345.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 341.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 340.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 334.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 331.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 324.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 318.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 315.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 311.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 309.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 308.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 302.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 298.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 295.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 293.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 293.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 292.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 289.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 287.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 287.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 285.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 281.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 278.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 278.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 277.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 276.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 273.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 272.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 268.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 267.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 266.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 265.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 261.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 261.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 260.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 257.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 249.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 248.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 247.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 246.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 245.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 244.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 243.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 243.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 233.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 232.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 232.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 232.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 227.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 222.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 222.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 221.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 220.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 218.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 217.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 216.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 216.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 214.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 214.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 214.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 213.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 212.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 210.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 210.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 209.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 208.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 208.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 208.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 206.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 202.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 196.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 194.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 193.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 193.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 191.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 190.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 188.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 187.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 183.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 182.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 181.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 181.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 181.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 180.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 178.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 177.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 177.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 177.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 171.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 170.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 170.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 168.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 167.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 166.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 165.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 164.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 162.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 162.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 162.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 152.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 150.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 149.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 147.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 147.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 146.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 143.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 142.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 141.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 141.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 137.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 136.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 136.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 135.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 134.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 134.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 134.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 133.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 132.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 131.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 130.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 129.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 128.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 126.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 126.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 124.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 123.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 123.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 120.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 119.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 119.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 119.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 117.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 116.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 114.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 113.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 110.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 109.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 107.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 107.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 106.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 106.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 105.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 104.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 102.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 99.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 97.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 95.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 93.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 93.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 92.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 91.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 90.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 89.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 86.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 84.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 83.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 82.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 80.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 80.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 79.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 77.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 75.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 75.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 74.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 73.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 73.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 72.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 67.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 67.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 67.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 58.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 53.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 45.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 39.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 35.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 31.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 31.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 27.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 27.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 12.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 83.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 83.2
FF:10164-103B2 76 years, female 83.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2.7
Pig sample Sample description nTPM
Caudate
nTPM: 2.7
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 2.7
Sample C Male 2.8
Sample D Male 2.9

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