HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.2 nTPM
HPA:28.2 nTPM
GTEx:23.7 nTPM
FANTOM5:48.3 Scaled Tags Per Million
Pig:888.0 nTPM
Mouse:94.6 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010485
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
1898 Male, age 80, left hemisphere 28.7
2148 Female, age 91, left hemisphere 27.2
1855 Male, age 76, left hemisphere 27.0
2621 Female, age 67, right hemisphere 26.8
2529 Female, age 94, left hemisphere 26.0
1911 Female, age 85, right hemisphere 24.6
Dentate gyrus
nTPM: 26.7
2530 Female, age 94, left hemisphere 28.6
2010 Male, age 76, both hemispheres 28.4
2528 Male, age 74, both hemispheres 27.4
1927 Female, age 91, both hemispheres 27.3
2246 Female, age 85, both hemispheres 24.5
2531 Female, age 67, both hemispheres 24.0
Entorhinal gyrus
nTPM: 26.5
2117 Female, age 91, right hemisphere 27.7
2764 Male, age 80, right hemisphere 27.4
1938 Female, age 85, left hemisphere 27.3
1787 Male, age 76, left hemisphere 27.1
2613 Female, age 94, left hemisphere 25.3
2686 Male, age 75, right hemisphere 24.3
Hippocampus, CA1
nTPM: 28.2
2749 Male, age 80, left hemisphere 35.3
1873 Female, age 85, both hemispheres 28.1
2527 Male, age 74, both hemispheres 27.5
2045 Male, age 76, both hemispheres 25.3
2082 Female, age 91, right hemisphere 24.7
Hippocampus, CA2
nTPM: 27.1
1963 Male, age 80, left hemisphere 31.3
1892 Male, age 76, both hemispheres 28.2
2249 Male, age 74, both hemispheres 27.4
2437 Female, age 94, left hemisphere 26.1
2113 Female, age 91, right hemisphere 25.3
1940 Female, age 85, left hemisphere 24.4
Hippocampus, CA3
nTPM: 27.4
2137 Male, age 80, left hemisphere 32.4
1867 Male, age 76, both hemispheres 28.6
2861 Female, age 67, both hemispheres 26.5
2436 Male, age 74, both hemispheres 26.4
1891 Female, age 85, both hemispheres 25.7
2620 Female, age 94, left hemisphere 25.0
Parahippocampal cortex
nTPM: 25.1
1850 Male, age 80, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.3
2250 Female, age 67, right hemisphere 25.8
2692 Male, age 74, both hemispheres 25.7
1933 Female, age 85, both hemispheres 25.0
2018 Male, age 76, both hemispheres 24.7
2622 Female, age 67, right hemisphere 24.7
2245 Female, age 91, both hemispheres 24.5
2532 Female, age 72, left hemisphere 23.6
2693 Female, age 94, both hemispheres 23.6
Perirhinal gyrus
nTPM: 24.8
1847 Female, age 91, left hemisphere 26.5
1794 Male, age 80, right hemisphere 25.2
2521 Female, age 94, right hemisphere 24.4
1841 Female, age 85, right hemisphere 24.1
2848 Male, age 76, right hemisphere 23.7
Subiculum
nTPM: 25.8
1901 Male, age 80, both hemispheres 27.4
2729 Female, age 91, right hemisphere 26.5
1977 Female, age 85, both hemispheres 26.1
2042 Male, age 76, both hemispheres 26.1
2619 Male, age 74, both hemispheres 25.8
2438 Female, age 94, left hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 39.1
Min nTPM: 17.4
Std nTPM: 3.5
Median nTPM: 23.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 39.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 36.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 36.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 31.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 30.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 29.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 29.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.3
FF:10153-102I9 76 years, female 58.9
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 888.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 888.0
Samples: 4

Max nTPM: 1155.4
Min nTPM: 685.9
Sample A Female 1155.4
Sample B Female 871.8
Sample C Male 838.8
Sample D Male 685.9
Entorhinal cortex
nTPM: 788.6
Samples: 4

Max nTPM: 879.0
Min nTPM: 668.3
Sample A Female 828.2
Sample B Female 879.0
Sample C Male 778.9
Sample D Male 668.3
Subiculum
nTPM: 786.6
Samples: 4

Max nTPM: 977.0
Min nTPM: 701.6
Sample A Female 977.0
Sample B Female 755.0
Sample C Male 701.6
Sample D Male 712.6
Ventral hippocampus
nTPM: 786.8
Samples: 4

Max nTPM: 858.7
Min nTPM: 623.3
Sample A Female 820.3
Sample B Female 623.3
Sample C Male 858.7
Sample D Male 844.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 92.0
Min nTPM: 83.2
Sample A Male 83.2
Sample B Male 92.0
Sample C Female 89.2
Sample D Female 90.1
Hippocampal formation
nTPM: 94.7
Samples: 4

Max nTPM: 99.0
Min nTPM: 87.3
Sample A Male 97.6
Sample B Male 94.8
Sample C Female 99.0
Sample D Female 87.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
79904741 Antisense, RP_080109_01_A02, Mouse strain C57BL/6J (56 days, male) 2.5
70919232 Antisense, RP_050712_04_H09, Mouse strain C57BL/6J (56 days, male) 0.7
70918904 Antisense, RP_050712_04_G04, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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