HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.3 nTPM
HPA:28.3 nTPM
GTEx:26.7 nTPM
FANTOM5:76.2 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:89.6 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040697Antibody HPA059818Antibody CAB045978
Glial cells LowMediumLow
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.0
2529 Female, age 94, left hemisphere 29.1
1898 Male, age 80, left hemisphere 28.3
1855 Male, age 76, left hemisphere 27.3
1911 Female, age 85, right hemisphere 27.3
2148 Female, age 91, left hemisphere 26.0
2621 Female, age 67, right hemisphere 24.2
Dentate gyrus
nTPM: 26.4
2530 Female, age 94, left hemisphere 28.6
2528 Male, age 74, both hemispheres 28.2
1927 Female, age 91, both hemispheres 26.7
2246 Female, age 85, both hemispheres 25.8
2010 Male, age 76, both hemispheres 24.8
2531 Female, age 67, both hemispheres 24.1
Entorhinal gyrus
nTPM: 27.3
2117 Female, age 91, right hemisphere 29.5
1938 Female, age 85, left hemisphere 27.4
2764 Male, age 80, right hemisphere 27.3
2686 Male, age 75, right hemisphere 27.2
1787 Male, age 76, left hemisphere 26.4
2613 Female, age 94, left hemisphere 25.8
Hippocampus, CA1
nTPM: 26.9
2527 Male, age 74, both hemispheres 30.3
1873 Female, age 85, both hemispheres 27.3
2749 Male, age 80, left hemisphere 26.5
2082 Female, age 91, right hemisphere 25.6
2045 Male, age 76, both hemispheres 24.7
Hippocampus, CA2
nTPM: 27.9
1940 Female, age 85, left hemisphere 29.2
2113 Female, age 91, right hemisphere 28.9
1892 Male, age 76, both hemispheres 28.0
2249 Male, age 74, both hemispheres 27.9
1963 Male, age 80, left hemisphere 27.8
2437 Female, age 94, left hemisphere 25.4
Hippocampus, CA3
nTPM: 25.6
1891 Female, age 85, both hemispheres 27.9
2436 Male, age 74, both hemispheres 26.9
1867 Male, age 76, both hemispheres 25.2
2137 Male, age 80, left hemisphere 24.7
2861 Female, age 67, both hemispheres 24.4
2620 Female, age 94, left hemisphere 24.3
Parahippocampal cortex
nTPM: 28.1
1850 Male, age 80, both hemispheres 29.7
2692 Male, age 74, both hemispheres 29.6
1990 Female, age 91, right hemisphere 29.5
2693 Female, age 94, both hemispheres 29.2
1933 Female, age 85, both hemispheres 28.9
2532 Female, age 72, left hemisphere 28.2
2250 Female, age 67, right hemisphere 27.8
2245 Female, age 91, both hemispheres 26.9
2018 Male, age 76, both hemispheres 26.8
2622 Female, age 67, right hemisphere 24.4
Perirhinal gyrus
nTPM: 28.3
1841 Female, age 85, right hemisphere 29.7
1847 Female, age 91, left hemisphere 29.2
1794 Male, age 80, right hemisphere 28.2
2848 Male, age 76, right hemisphere 27.2
2521 Female, age 94, right hemisphere 27.1
Subiculum
nTPM: 27.6
2619 Male, age 74, both hemispheres 29.4
2438 Female, age 94, left hemisphere 28.1
2729 Female, age 91, right hemisphere 28.0
1901 Male, age 80, both hemispheres 27.8
1977 Female, age 85, both hemispheres 26.7
2042 Male, age 76, both hemispheres 25.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.7
Samples: 197

Max nTPM: 48.3
Min nTPM: 12.9
Std nTPM: 5.4
Median nTPM: 26.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 48.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 44.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 37.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 37.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 37.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 36.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 36.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 35.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.2
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 71.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 22.0
Min nTPM: 12.8
Sample A Female 22.0
Sample B Female 16.3
Sample C Male 19.3
Sample D Male 12.8
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.8
Sample A Female 16.2
Sample B Female 18.7
Sample C Male 15.7
Sample D Male 13.8
Subiculum
nTPM: 16.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.7
Sample A Female 19.5
Sample B Female 16.1
Sample C Male 14.9
Sample D Male 14.7
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 17.3
Min nTPM: 14.6
Sample A Female 16.8
Sample B Female 14.6
Sample C Male 16.9
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 84.2
Samples: 4

Max nTPM: 89.5
Min nTPM: 80.8
Sample A Male 83.8
Sample B Male 80.8
Sample C Female 89.5
Sample D Female 82.7
Hippocampal formation
nTPM: 89.6
Samples: 4

Max nTPM: 95.7
Min nTPM: 82.1
Sample A Male 95.7
Sample B Male 82.1
Sample C Female 89.6
Sample D Female 91.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69028557 Antisense, RP_050316_01_E09, Mouse strain C57BL/6J (56 days, male) 5.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.