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ACAA2
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  • ACAA2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:68.7 nTPM
FANTOM5:68.8 Scaled Tags Per Million
Pig:6.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042303
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 68.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 68.7
Samples: 246

Max nTPM: 185.3
Min nTPM: 14.6
Std nTPM: 25.4
Median nTPM: 65.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 185.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 148.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 134.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 132.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 131.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 127.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 120.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 118.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 117.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 116.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 115.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 115.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 110.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 110.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 108.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 108.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 107.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 107.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 106.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 106.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 104.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 103.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 103.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 102.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 102.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 102.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 101.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 100.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 99.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 98.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 97.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 95.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 95.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 94.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 93.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 93.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 93.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 93.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 92.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 92.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 91.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 91.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 90.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 89.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 89.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 89.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 88.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 88.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 88.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 87.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 87.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 87.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 86.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 86.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 86.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 86.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 85.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 85.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 84.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 83.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 83.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 82.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 82.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 82.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 81.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 81.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 80.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 79.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 79.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 79.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 78.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 78.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 78.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 78.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 77.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 77.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 76.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 76.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 76.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 76.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 75.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 75.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 74.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 73.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 73.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 73.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 72.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 72.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 72.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 72.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 71.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 71.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 70.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 70.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 70.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 69.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 69.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 69.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 68.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 68.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 67.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 67.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 66.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 66.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 65.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 65.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 65.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 65.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 64.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 64.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 64.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 63.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 62.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 62.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 62.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 62.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 61.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 60.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 59.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 58.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 58.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 57.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 57.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 57.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 56.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 56.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 56.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 55.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 55.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 55.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 54.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 54.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 53.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 53.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 52.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 51.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 51.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 51.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 49.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 49.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 49.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 49.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 48.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 47.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 47.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 47.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 46.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 46.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 46.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 46.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 46.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 46.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 45.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 45.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 45.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 44.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 43.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 43.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 42.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 42.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 42.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 41.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 41.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 41.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 41.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 41.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 41.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 40.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 40.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 40.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 40.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 39.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 38.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 38.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 37.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 35.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 34.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 33.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 31.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 31.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 31.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 28.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 27.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 26.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 24.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 23.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 19.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 14.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 68.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 68.8
FF:10164-103B2 76 years, female 68.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 6.2
Pig sample Sample description nTPM
Caudate
nTPM: 6.2
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.9
Sample A Female 6.0
Sample B Female 6.3
Sample C Male 6.5
Sample D Male 5.9

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