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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:472.8 nTPM
FANTOM5:502.7 Scaled Tags Per Million
Pig:75.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047224Antibody HPA058546Antibody CAB008630
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedNot detectedLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 472.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 472.8
Samples: 246

Max nTPM: 1004.0
Min nTPM: 201.2
Std nTPM: 120.6
Median nTPM: 456.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1004.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 926.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 925.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 823.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 806.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 774.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 774.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 773.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 759.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 755.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 725.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 715.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 707.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 673.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 665.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 664.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 663.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 654.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 648.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 640.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 633.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 627.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 625.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 617.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 606.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 605.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 604.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 601.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 598.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 595.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 593.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 586.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 585.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 583.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 583.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 583.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 582.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 578.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 578.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 576.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 575.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 574.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 573.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 572.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 570.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 570.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 568.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 568.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 567.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 565.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 556.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 553.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 548.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 545.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 544.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 540.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 539.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 538.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 537.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 536.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 529.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 522.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 521.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 521.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 520.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 516.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 516.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 514.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 514.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 512.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 511.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 508.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 508.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 506.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 506.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 503.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 503.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 502.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 501.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 500.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 498.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 498.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 498.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 496.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 496.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 495.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 495.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 494.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 494.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 490.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 489.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 489.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 486.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 483.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 482.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 482.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 481.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 478.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 476.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 474.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 474.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 473.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 472.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 471.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 470.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 470.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 468.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 467.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 465.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 465.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 465.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 463.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 461.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 461.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 460.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 460.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 458.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 458.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 458.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 458.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 457.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 457.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 456.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 456.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 456.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 456.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 452.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 451.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 451.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 448.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 448.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 447.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 447.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 446.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 446.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 445.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 445.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 439.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 439.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 439.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 438.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 438.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 437.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 437.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 433.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 433.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 431.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 430.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 430.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 430.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 429.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 428.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 426.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 426.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 425.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 425.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 425.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 423.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 422.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 422.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 422.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 418.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 418.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 417.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 416.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 415.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 414.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 414.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 411.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 410.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 410.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 409.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 408.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 407.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 407.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 405.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 405.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 404.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 404.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 403.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 400.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 399.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 399.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 399.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 398.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 396.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 396.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 395.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 395.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 394.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 393.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 393.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 393.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 393.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 392.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 388.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 388.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 383.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 383.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 379.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 377.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 375.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 374.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 373.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 371.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 371.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 370.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 369.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 368.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 366.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 363.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 363.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 361.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 357.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 356.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 356.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 354.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 354.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 353.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 350.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 340.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 338.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 337.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 337.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 336.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 330.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 328.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 327.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 324.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 322.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 319.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 316.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 314.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 312.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 312.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 303.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 292.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 292.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 291.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 286.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 271.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 270.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 261.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 256.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 203.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 201.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 502.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 502.7
FF:10164-103B2 76 years, female 502.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 75.7
Pig sample Sample description nTPM
Caudate
nTPM: 75.7
Samples: 4

Max nTPM: 93.3
Min nTPM: 63.3
Sample A Female 63.3
Sample B Female 83.0
Sample C Male 93.3
Sample D Male 63.3

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