HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.7 nTPM
HPA:24.7 nTPM
GTEx:41.0 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:24.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041404Antibody HPA048250
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.1
1898 Male, age 80, left hemisphere 25.1
1911 Female, age 85, right hemisphere 23.2
2621 Female, age 67, right hemisphere 23.2
1855 Male, age 76, left hemisphere 23.1
2148 Female, age 91, left hemisphere 23.0
2529 Female, age 94, left hemisphere 21.1
Dentate gyrus
nTPM: 24.5
2530 Female, age 94, left hemisphere 29.0
2010 Male, age 76, both hemispheres 26.6
2528 Male, age 74, both hemispheres 23.2
1927 Female, age 91, both hemispheres 23.0
2531 Female, age 67, both hemispheres 22.9
2246 Female, age 85, both hemispheres 22.3
Entorhinal gyrus
nTPM: 24.4
2613 Female, age 94, left hemisphere 26.2
2764 Male, age 80, right hemisphere 25.8
2686 Male, age 75, right hemisphere 25.5
2117 Female, age 91, right hemisphere 23.5
1938 Female, age 85, left hemisphere 23.1
1787 Male, age 76, left hemisphere 22.1
Hippocampus, CA1
nTPM: 24.7
2749 Male, age 80, left hemisphere 31.3
1873 Female, age 85, both hemispheres 26.9
2045 Male, age 76, both hemispheres 22.6
2527 Male, age 74, both hemispheres 22.4
2082 Female, age 91, right hemisphere 20.3
Hippocampus, CA2
nTPM: 23.7
1963 Male, age 80, left hemisphere 28.5
1892 Male, age 76, both hemispheres 25.1
2437 Female, age 94, left hemisphere 24.0
2249 Male, age 74, both hemispheres 22.3
1940 Female, age 85, left hemisphere 21.8
2113 Female, age 91, right hemisphere 20.4
Hippocampus, CA3
nTPM: 23.6
2861 Female, age 67, both hemispheres 25.6
1867 Male, age 76, both hemispheres 25.4
2620 Female, age 94, left hemisphere 23.8
2137 Male, age 80, left hemisphere 23.3
1891 Female, age 85, both hemispheres 22.4
2436 Male, age 74, both hemispheres 21.3
Parahippocampal cortex
nTPM: 22.9
2622 Female, age 67, right hemisphere 26.8
2532 Female, age 72, left hemisphere 24.3
1933 Female, age 85, both hemispheres 24.2
2693 Female, age 94, both hemispheres 23.0
2245 Female, age 91, both hemispheres 22.9
2692 Male, age 74, both hemispheres 22.1
1850 Male, age 80, both hemispheres 22.0
2250 Female, age 67, right hemisphere 22.0
1990 Female, age 91, right hemisphere 21.3
2018 Male, age 76, both hemispheres 20.8
Perirhinal gyrus
nTPM: 21.5
2521 Female, age 94, right hemisphere 22.9
1847 Female, age 91, left hemisphere 22.2
1841 Female, age 85, right hemisphere 21.5
1794 Male, age 80, right hemisphere 21.1
2848 Male, age 76, right hemisphere 19.7
Subiculum
nTPM: 22.1
1977 Female, age 85, both hemispheres 24.5
1901 Male, age 80, both hemispheres 22.2
2729 Female, age 91, right hemisphere 22.1
2042 Male, age 76, both hemispheres 22.0
2619 Male, age 74, both hemispheres 22.0
2438 Female, age 94, left hemisphere 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.0
Samples: 197

Max nTPM: 92.3
Min nTPM: 12.1
Std nTPM: 12.5
Median nTPM: 38.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 92.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 73.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 72.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 72.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 71.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 69.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 66.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 65.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 64.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 64.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.4
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 33.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 31.7
Min nTPM: 17.8
Sample A Female 31.7
Sample B Female 26.5
Sample C Male 17.8
Sample D Male 19.3
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 18.6
Sample A Female 21.5
Sample B Female 21.1
Sample C Male 24.6
Sample D Male 18.6
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 18.7
Sample A Female 27.7
Sample B Female 19.7
Sample C Male 19.9
Sample D Male 18.7
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 28.5
Min nTPM: 18.4
Sample A Female 24.9
Sample B Female 18.4
Sample C Male 28.5
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.8
Min nTPM: 19.9
Sample A Male 27.8
Sample B Male 26.6
Sample C Female 19.9
Sample D Female 22.0
Hippocampal formation
nTPM: 22.6
Samples: 4

Max nTPM: 23.7
Min nTPM: 21.5
Sample A Male 23.7
Sample B Male 22.5
Sample C Female 21.5
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
79536365 Antisense, RP_071018_01_A06, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.