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RPL13
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  • TISSUE

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  • RPL13
PATHOLOGY OVARIAN CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
ANTIBODIES
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VALIDATION
Dictionary
Ovarian cancer
Human pathology
Ovarian cancer
OVARIAN CANCER - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

Read more
RPL13 is not prognostic in ovarian cancer


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

Read more
: 290.72
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

Read more
: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM 311.8
Number of samples 373
Samples
Sample Description FPKM
TCGA-09-2056-01B 62 years, female, white, alive, 379 days 2612.8
TCGA-23-1021-01B 45 years, female, white, dead, 1446 days 1881.7
TCGA-09-0367-01A 67 years, female, native hawaiian or other pacific islander, dead, 547 days 1429.3
TCGA-04-1542-01A 52 years, female, white, dead, 2561 days 1312.9
TCGA-23-1024-01A 52 years, female, white, alive, 468 days 1207.0
TCGA-30-1853-01A 58 years, female, white, dead, 1103 days 1105.9
TCGA-13-0765-01A 50 years, female, white, dead, 1389 days 1100.4
TCGA-13-1409-01A 73 years, female, white, dead, 1742 days 1014.8
TCGA-24-2038-01A 68 years, female, white, dead, 1354 days 981.9
TCGA-13-1510-01A 62 years, female, white, dead, 1359 days 947.8
TCGA-61-2110-01A 56 years, female, white, dead, 1354 days 890.6
TCGA-10-0927-01A 65 years, female, dead, 2490 days 888.0
TCGA-25-1634-01A 76 years, female, white, dead, 1091 days 830.9
TCGA-29-2425-01A 60 years, female, white, alive, 1977 days 801.3
TCGA-61-1721-01A 38 years, female, white, alive, 338 days 780.8
TCGA-04-1350-01A 46 years, female, white, dead, 1946 days 774.6
TCGA-09-1659-01B 51 years, female, white, dead, 304 days 772.6
TCGA-23-1022-01A 67 years, female, white, dead, 1511 days 762.8
TCGA-13-0724-01A 72 years, female, white, dead, 83 days 761.7
TCGA-13-1477-01A 49 years, female, white, dead, 1662 days 747.9
TCGA-24-1431-01A 67 years, female, white, dead, 567 days 707.5
TCGA-29-1768-01A 50 years, female, white, dead, 952 days 662.7
TCGA-13-0901-01B 42 years, female, asian, alive, 589 days 639.9
TCGA-25-1630-01A 73 years, female, white, dead, 1162 days 634.7
TCGA-61-2092-01A 57 years, female, white, alive, 1573 days 611.8
TCGA-29-1690-01A 66 years, female, white, dead, 1448 days 611.7
TCGA-57-1583-01A 57 years, female, black or african american, dead, 346 days 607.0
TCGA-24-1471-01A 60 years, female, white, alive, 36 days 605.9
TCGA-24-1562-01A 67 years, female, white, dead, 1384 days 601.9
TCGA-25-2393-01A 81 years, female, white, dead, 1157 days 600.4
TCGA-04-1519-01A 48 years, female, alive, 24 days 594.2
TCGA-29-1770-01A 54 years, female, white, alive, 741 days 588.2
TCGA-10-0938-01A 80 years, female, white, dead, 636 days 581.8
TCGA-29-1777-01A 47 years, female, white, alive, 374 days 574.9
TCGA-24-1553-01A 53 years, female, white, dead, 1767 days 574.5
TCGA-09-0364-01A 80 years, female, white, dead, 887 days 563.7
TCGA-29-1696-01A 43 years, female, white, dead, 1032 days 545.2
TCGA-24-2033-01A 87 years, female, white, dead, 562 days 543.6
TCGA-13-0795-01A 66 years, female, white, dead, 619 days 539.5
TCGA-09-1666-01A 57 years, female, white, alive, 1752 days 538.9
TCGA-29-1761-01A 80 years, female, asian, dead, 528 days 528.3
TCGA-61-2002-01A 46 years, female, white, alive, 547 days 527.5
TCGA-10-0931-01A 44 years, female, white, dead, 1000 days 527.4
TCGA-61-1728-01A 59 years, female, white, alive, 848 days 527.1
TCGA-61-1738-01A 60 years, female, black or african american, dead, 1089 days 518.6
TCGA-23-1113-01A 48 years, female, white, dead, 949 days 517.6
TCGA-25-1316-01A 55 years, female, white, dead, 1279 days 516.6
TCGA-10-0937-01A 44 years, female, white, dead, 608 days 516.0
TCGA-30-1891-01A 61 years, female, white, dead, 914 days 509.2
TCGA-13-1489-01A 70 years, female, white, dead, 2553 days 494.2
TCGA-13-0887-01A 42 years, female, white, dead, 2028 days 492.5
TCGA-24-0966-01A 78 years, female, black or african american, alive, 232 days 480.9
TCGA-25-1328-01A 38 years, female, white, dead, 2009 days 478.1
TCGA-24-1923-01A 51 years, female, white, dead, 690 days 472.4
TCGA-24-1845-01A 42 years, female, white, alive, 116 days 471.7
TCGA-13-0804-01A 74 years, female, white, dead, 1073 days 471.7
TCGA-04-1655-01A 49 years, female, white, dead, 1380 days 470.8
TCGA-13-0727-01A 71 years, female, white, dead, 462 days 468.3
TCGA-30-1892-01A 52 years, female, white, dead, 1484 days 466.1
TCGA-25-1317-01A 66 years, female, white, dead, 61 days 465.7
TCGA-24-1616-01A 56 years, female, white, dead, 1163 days 459.6
TCGA-13-0883-01A 61 years, female, white, dead, 2097 days 458.4
TCGA-13-0923-01A 74 years, female, white, alive, 2547 days 456.1
TCGA-59-2351-01A female, white, alive, 3532 days 446.8
TCGA-24-1464-01A 70 years, female, white, dead, 379 days 446.0
TCGA-13-1501-01A 50 years, female, white, dead, 1314 days 444.3
TCGA-29-1703-01A 56 years, female, black or african american, dead, 1815 days 443.7
TCGA-25-1631-01A 73 years, female, white, dead, 9 days 436.5
TCGA-23-1030-01A 64 years, female, white, alive, 886 days 434.2
TCGA-20-0991-01A 78 years, female, white, alive, 797 days 432.5
TCGA-30-1718-01A 44 years, female, white, dead, 1579 days 432.5
TCGA-OY-A56Q-01A 78 years, female, black or african american, alive, 576 days 430.9
TCGA-13-0725-01A 44 years, female, white, dead, 377 days 427.7
TCGA-04-1536-01A 60 years, female, black or african american, dead, 885 days 425.9
TCGA-13-0924-01A 45 years, female, white, alive, 2614 days 422.7
TCGA-23-1110-01A 42 years, female, white, alive, 1658 days 421.7
TCGA-25-1877-01A 81 years, female, white, dead, 730 days 418.4
TCGA-29-1701-01A 56 years, female, white, dead, 515 days 414.7
TCGA-61-2101-01A 55 years, female, white, dead, 1688 days 414.2
TCGA-10-0936-01A 69 years, female, black or african american, dead, 1123 days 411.7
TCGA-23-1027-01A 48 years, female, white, dead, 976 days 403.2
TCGA-09-2053-01C 72 years, female, white, alive, 1209 days 392.2
TCGA-29-1688-01A 39 years, female, white, dead, 2400 days 390.1
TCGA-24-1467-01A 51 years, female, white, dead, 3224 days 388.6
TCGA-09-1670-01A 57 years, female, white, alive, 547 days 387.2
TCGA-13-1407-01A 51 years, female, white, alive, 2534 days 380.3
TCGA-61-1918-01A 45 years, female, white, dead, 479 days 377.0
TCGA-24-1565-01A 74 years, female, white, dead, 312 days 373.1
TCGA-13-0766-01A 42 years, female, white, dead, 1725 days 369.6
TCGA-13-1404-01A 48 years, female, white, alive, 2469 days 369.5
TCGA-59-2355-01A female, white, dead, 65 days 367.7
TCGA-13-1485-01A 48 years, female, white, dead, 629 days 364.4
TCGA-29-1778-01A 77 years, female, white, alive, 454 days 363.8
TCGA-20-1686-01A 75 years, female, white, alive, 89 days 363.4
TCGA-25-2396-01A 71 years, female, white, dead, 92 days 361.8
TCGA-30-1862-01A 65 years, female, white, dead, 186 days 361.8
TCGA-29-1705-01A 48 years, female, white, dead, 555 days 358.3
TCGA-09-1661-01B 75 years, female, white, dead, 1169 days 357.9
TCGA-61-1725-01A 40 years, female, white, alive, 956 days 356.1
TCGA-04-1341-01A 85 years, female, white, alive, 33 days 354.6
TCGA-61-2009-01A 65 years, female, white, alive, 1212 days 353.6
TCGA-04-1347-01A 81 years, female, white, alive, 1919 days 351.8
TCGA-25-1870-01A 59 years, female, white, dead, 455 days 349.9
TCGA-20-1687-01A 46 years, female, white, alive, 81 days 349.9
TCGA-13-1509-01A 64 years, female, white, alive, 2438 days 349.6
TCGA-24-1103-01A 50 years, female, black or african american, dead, 1646 days 346.3
TCGA-24-1604-01A 67 years, female, white, dead, 2688 days 345.0
TCGA-13-0884-01B 39 years, female, white, dead, 3260 days 343.5
TCGA-24-0982-01A 77 years, female, white, dead, 679 days 341.2
TCGA-24-1426-01A 43 years, female, white, alive, 163 days 339.6
TCGA-29-1776-01A 63 years, female, black or african american, alive, 360 days 338.4
TCGA-13-0920-01A 65 years, female, white, dead, 1484 days 335.2
TCGA-24-2267-01A 58 years, female, white, dead, 1446 days 334.8
TCGA-24-1544-01A 71 years, female, black or african american, dead, 820 days 329.5
TCGA-13-0911-01A 55 years, female, white, dead, 1355 days 320.0
TCGA-13-1498-01A 73 years, female, white, dead, 2012 days 319.9
TCGA-10-0928-01A 71 years, female, white, dead, 563 days 318.7
TCGA-04-1364-01A 61 years, female, white, dead, 1024 days 318.5
TCGA-13-1488-01A 59 years, female, white, dead, 2154 days 318.0
TCGA-25-2409-01A 71 years, female, white, dead, 821 days 316.8
TCGA-13-1403-01A 48 years, female, white, dead, 2345 days 315.2
TCGA-23-1107-01A 59 years, female, white, dead, 9 days 314.3
TCGA-29-1766-01A 74 years, female, white, dead, 1199 days 313.7
TCGA-24-1850-01A 72 years, female, white, alive, 168 days 312.7
TCGA-57-1585-01A 57 years, female, white, dead, 53 days 310.2
TCGA-24-1416-01A 34 years, female, white, alive, 194 days 310.0
TCGA-24-2281-01A 68 years, female, white, alive, 1357 days 306.2
TCGA-61-1919-01A 58 years, female, white, dead, 1161 days 305.4
TCGA-29-1783-01A 58 years, female, white, alive, 220 days 305.0
TCGA-24-2024-01A 72 years, female, black or african american, dead, 1769 days 304.2
TCGA-13-0714-01A 55 years, female, white, dead, 189 days 302.7
TCGA-23-2084-01A 45 years, female, white, dead, 1516 days 301.9
TCGA-24-1842-01A 49 years, female, white, alive, 253 days 299.5
TCGA-30-1714-01A 68 years, female, white, dead, 1158 days 292.8
TCGA-24-1846-01A 45 years, female, alive, 133 days 288.6
TCGA-23-2077-01A 45 years, female, white, alive, 3525 days 288.0
TCGA-23-1116-01A 83 years, female, white, dead, 592 days 287.6
TCGA-25-1632-01A 68 years, female, white, dead, 1799 days 287.1
TCGA-13-0762-01A 65 years, female, white, alive, 3400 days 286.2
TCGA-29-1774-01A 82 years, female, white, alive, 527 days 284.3
TCGA-13-0885-01A 70 years, female, white, alive, 3388 days 282.6
TCGA-24-1924-01A 65 years, female, white, dead, 919 days 282.3
TCGA-25-1633-01A 64 years, female, white, dead, 1891 days 281.9
TCGA-04-1343-01A 72 years, female, white, dead, 361 days 281.5
TCGA-29-2414-01A 75 years, female, white, dead, 2621 days 281.3
TCGA-23-1026-01B 45 years, female, white, alive, 816 days 279.5
TCGA-09-2048-01A 63 years, female, white, dead, 138 days 279.1
TCGA-04-1332-01A 70 years, female, white, dead, 1247 days 277.5
TCGA-09-1669-01A 54 years, female, white, alive, 928 days 275.7
TCGA-30-1857-01A 64 years, female, white, dead, 8 days 273.7
TCGA-09-0369-01A 56 years, female, white, dead, 1082 days 273.6
TCGA-24-1560-01A 51 years, female, white, dead, 1341 days 273.5
TCGA-04-1514-01A 45 years, female, white, dead, 1720 days 273.2
TCGA-57-1586-01A 66 years, female, white, alive, 679 days 272.9
TCGA-13-1506-01A 45 years, female, white, dead, 1039 days 271.0
TCGA-23-2078-01A 66 years, female, white, alive, 2661 days 270.0
TCGA-61-2104-01A 53 years, female, white, alive, 2338 days 269.8
TCGA-36-1574-01A 48 years, female, asian, alive, 686 days 269.0
TCGA-61-1724-01A 47 years, female, white, dead, 637 days 268.6
TCGA-24-1930-01A 53 years, female, white, dead, 2467 days 265.7
TCGA-23-1111-01A 63 years, female, white, alive, 98 days 264.6
TCGA-36-1580-01A 82 years, female, dead, 737 days 264.6
TCGA-29-1694-01A 45 years, female, white, dead, 1187 days 263.8
TCGA-59-2363-01A female, asian, alive, 165 days 262.2
TCGA-36-1569-01A 52 years, female, white, alive, 885 days 262.1
TCGA-04-1651-01A 53 years, female, white, dead, 1102 days 261.5
TCGA-13-2060-01A 51 years, female, white, alive, 2369 days 261.4
TCGA-29-2427-01A 60 years, female, white, alive, 1900 days 261.1
TCGA-25-2400-01A 76 years, female, white, dead, 1278 days 260.0
TCGA-13-1499-01A 56 years, female, white, alive, 3500 days 259.5
TCGA-61-1733-01A 71 years, female, white, alive, 967 days 258.5
TCGA-23-1109-01A 63 years, female, white, dead, 1562 days 256.6
TCGA-04-1361-01A 57 years, female, white, alive, 989 days 256.2
TCGA-13-0891-01A 73 years, female, white, dead, 3128 days 254.5
TCGA-29-1784-01A 55 years, female, white, alive, 163 days 253.9
TCGA-61-2008-01A 40 years, female, asian, alive, 932 days 253.5
TCGA-13-0886-01A 67 years, female, white, alive, 4665 days 251.9
TCGA-24-1430-01A 68 years, female, white, dead, 863 days 251.4
TCGA-09-2045-01A 50 years, female, asian, dead, 1069 days 250.3
TCGA-61-2109-01A 40 years, female, white, dead, 629 days 249.9
TCGA-13-1507-01A 77 years, female, white, dead, 1993 days 247.1
TCGA-09-1667-01C 61 years, female, white, alive, 1882 days 247.1
TCGA-61-1911-01A 55 years, female, white, alive, 1293 days 245.9
TCGA-13-1483-01A 61 years, female, white, dead, 895 days 245.0
TCGA-25-1323-01A 72 years, female, white, dead, 395 days 241.9
TCGA-24-1843-01A 67 years, female, white, alive, 106 days 241.1
TCGA-13-0726-01A 55 years, female, white, dead, 949 days 240.7
TCGA-13-0905-01B 51 years, female, white, alive, 3746 days 240.5
TCGA-13-1495-01A 60 years, female, white, dead, 2749 days 239.4
TCGA-25-1315-01A 50 years, female, white, dead, 1583 days 237.8
TCGA-61-1914-01A 65 years, female, alive, 1722 days 235.8
TCGA-04-1338-01A 78 years, female, white, alive, 1418 days 234.9
TCGA-13-0730-01A 71 years, female, white, dead, 542 days 234.2
TCGA-24-1428-01A 50 years, female, white, alive, 529 days 232.5
TCGA-WR-A838-01A 72 years, female, black or african american, dead, 304 days 232.4
TCGA-23-1023-01A 65 years, female, white, alive, 1233 days 231.8
TCGA-24-1418-01A 68 years, female, white, alive, 243 days 231.3
TCGA-24-1413-01A 51 years, female, white, alive, 192 days 231.1
TCGA-20-1682-01A 56 years, female, white, alive, 837 days 230.8
TCGA-23-1118-01A 45 years, female, white, alive, 2616 days 229.9
TCGA-61-1998-01A 48 years, female, white, alive, 168 days 229.9
TCGA-09-1662-01A 58 years, female, white, dead, 2717 days 229.5
TCGA-23-1119-01A 64 years, female, white, alive, 3953 days 228.8
TCGA-36-1568-01A 52 years, female, alive, 875 days 228.8
TCGA-29-1693-01A 72 years, female, white, alive, 3096 days 227.8
TCGA-36-1577-01A 43 years, female, asian, alive, 783 days 227.6
TCGA-13-1505-01A 63 years, female, white, alive, 1998 days 226.3
TCGA-23-1028-01A 43 years, female, white, alive, 1503 days 225.1
TCGA-13-0797-01A 49 years, female, white, alive, 2121 days 223.7
TCGA-59-2354-01A female, white, dead, 1046 days 222.9
TCGA-13-0897-01A 54 years, female, white, dead, 2182 days 222.5
TCGA-13-1487-01A 74 years, female, white, dead, 681 days 222.1
TCGA-59-A5PD-01A 55 years, female, black or african american, dead, 624 days 221.8
TCGA-61-2000-01A 67 years, female, white, alive, 441 days 221.2
TCGA-25-1312-01A 69 years, female, white, dead, 31 days 219.7
TCGA-04-1356-01A 62 years, female, white, dead, 1499 days 219.6
TCGA-13-1496-01A 65 years, female, white, dead, 129 days 219.3
TCGA-24-2023-01A 54 years, female, white, dead, 1364 days 218.9
TCGA-61-1910-01A 56 years, female, white, alive, 1127 days 218.9
TCGA-24-1546-01A 46 years, female, white, dead, 1955 days 218.7
TCGA-25-2401-01A 64 years, female, white, dead, 90 days 217.8
TCGA-30-1866-01A 61 years, female, white, dead, 1114 days 217.7
TCGA-24-0968-01A 59 years, female, white, dead, 598 days 216.6
TCGA-29-1781-01A 69 years, female, white, alive, 255 days 215.5
TCGA-61-1736-01B 45 years, female, white, dead, 1484 days 215.0
TCGA-24-2290-01A 56 years, female, white, dead, 1102 days 214.6
TCGA-09-2044-01B 77 years, female, asian, alive, 186 days 214.5
TCGA-29-1769-01A 40 years, female, white, alive, 699 days 211.4
TCGA-29-1785-01A 55 years, female, white, dead, 1104 days 211.4
TCGA-29-1710-01A 54 years, female, white, dead, 951 days 208.0
TCGA-36-1571-01A 53 years, female, white, dead, 695 days 207.5
TCGA-04-1648-01A 57 years, female, white, dead, 871 days 207.0
TCGA-24-2035-01A 65 years, female, white, dead, 857 days 204.1
TCGA-13-1408-01A 59 years, female, white, dead, 1680 days 202.5
TCGA-24-1422-01A 82 years, female, black or african american, dead, 23 days 202.4
TCGA-25-2391-01A 57 years, female, white, dead, 1492 days 202.3
TCGA-13-1497-01A 48 years, female, white, alive, 3871 days 201.8
TCGA-57-1584-01A 47 years, female, white, alive, 643 days 199.4
TCGA-09-0366-01A 56 years, female, white, dead, 1757 days 199.3
TCGA-31-1956-01A 60 years, female, white, alive, 1342 days 198.4
TCGA-10-0933-01A 77 years, female, white, dead, 446 days 198.3
TCGA-23-1122-01A 53 years, female, white, dead, 1189 days 198.1
TCGA-24-1424-01A 67 years, female, white, alive, 183 days 197.3
TCGA-24-1423-01A 61 years, female, white, alive, 190 days 197.1
TCGA-25-1321-01A 65 years, female, white, dead, 1033 days 196.9
TCGA-09-1673-01A 50 years, female, white, alive, 92 days 195.6
TCGA-23-1123-01A 59 years, female, white, dead, 1018 days 195.5
TCGA-30-1860-01A 58 years, female, white, dead, 1366 days 195.2
TCGA-13-A5FT-01A 67 years, female, black or african american, alive, 2143 days 195.2
TCGA-24-1419-01A 62 years, female, white, alive, 239 days 194.8
TCGA-25-1627-01A 73 years, female, white, dead, 394 days 194.5
TCGA-13-0906-01A 50 years, female, white, alive, 3619 days 193.5
TCGA-61-1907-01A 63 years, female, white, alive, 952 days 191.0
TCGA-24-2298-01A 56 years, female, white, dead, 1620 days 190.3
TCGA-13-1512-01A 49 years, female, white, alive, 442 days 189.7
TCGA-13-0768-01A 73 years, female, white, dead, 1784 days 189.3
TCGA-29-1711-01A 45 years, female, black or african american, alive, 1053 days 188.8
TCGA-29-1762-01A 59 years, female, white, dead, 2634 days 187.5
TCGA-61-1900-01A 51 years, female, black or african american, alive, 176 days 187.0
TCGA-13-0800-01A 52 years, female, white, alive, 2661 days 187.0
TCGA-29-2428-01A 58 years, female, white, alive, 1372 days 186.8
TCGA-5X-AA5U-01A 61 years, female, black or african american, alive, 361 days 185.9
TCGA-13-0888-01A 78 years, female, white, dead, 2811 days 185.6
TCGA-13-0893-01B 48 years, female, black or african american, dead, 1319 days 185.1
TCGA-24-2288-01A 70 years, female, white, dead, 25 days 184.1
TCGA-13-1411-01A 81 years, female, white, dead, 531 days 183.6
TCGA-20-1683-01A 65 years, female, white, alive, 772 days 183.3
TCGA-13-1410-01A 57 years, female, white, alive, 2464 days 183.1
TCGA-30-1861-01A 74 years, female, white, dead, 1058 days 182.3
TCGA-24-1104-01A 56 years, female, white, dead, 1933 days 180.7
TCGA-61-1737-01A 42 years, female, white, alive, 1364 days 179.5
TCGA-24-1603-01A 53 years, female, white, dead, 2742 days 179.4
TCGA-59-2350-01A female, dead, 679 days 179.0
TCGA-09-2054-01A 58 years, female, black or african american, dead, 637 days 178.8
TCGA-24-1558-01A 73 years, female, white, dead, 594 days 178.2
TCGA-24-0979-01A 53 years, female, white, dead, 1264 days 177.9
TCGA-13-0720-01A 48 years, female, white, dead, 1355 days 177.1
TCGA-25-1635-01A 71 years, female, white, dead, 1583 days 176.5
TCGA-61-1995-01A 43 years, female, white, alive, 61 days 176.2
TCGA-36-1576-01A 76 years, female, alive, 915 days 175.4
TCGA-04-1365-01A 87 years, female, white, alive, 2329 days 174.1
TCGA-24-2026-01A 79 years, female, white, dead, 1059 days 173.4
TCGA-VG-A8LO-01A 55 years, female, black or african american, dead, 24 days 173.2
TCGA-24-1549-01A 58 years, female, white, dead, 1721 days 172.6
TCGA-25-1313-01A 62 years, female, white, dead, 820 days 171.2
TCGA-24-1435-01A 57 years, female, white, dead, 1324 days 170.6
TCGA-20-0987-01A 61 years, female, white, dead, 701 days 170.1
TCGA-24-1552-01A 77 years, female, white, dead, 1259 days 169.3
TCGA-61-2097-01A 71 years, female, white, alive, 1844 days 168.7
TCGA-24-2293-01A 47 years, female, white, dead, 506 days 168.7
TCGA-25-2404-01A 38 years, female, american indian or alaska native, dead, 883 days 168.6
TCGA-24-2280-01A 74 years, female, white, alive, 2143 days 165.2
TCGA-24-1844-01A 64 years, female, white, alive, 113 days 164.6
TCGA-23-1029-01B 46 years, female, white, alive, 268 days 164.4
TCGA-24-0970-01B 63 years, female, white, dead, 354 days 162.7
TCGA-24-1417-01A 54 years, female, white, alive, 238 days 161.1
TCGA-24-2254-01A 66 years, female, white, dead, 1736 days 160.8
TCGA-13-0916-01A 49 years, female, white, alive, 1785 days 159.8
TCGA-25-2392-01A 75 years, female, white, dead, 31 days 158.0
TCGA-31-1944-01A 47 years, female, white, alive, 1386 days 155.9
TCGA-29-1763-01A 43 years, female, black or african american, alive, 2032 days 155.9
TCGA-24-1563-01A 66 years, female, black or african american, dead, 1451 days 154.7
TCGA-24-1928-01A 77 years, female, white, dead, 336 days 154.6
TCGA-31-1953-01A 52 years, female, asian, alive, 204 days 154.6
TCGA-23-1809-01A 63 years, female, white, alive, 16 days 154.1
TCGA-61-2111-01A 61 years, female, white, alive, 3825 days 153.5
TCGA-24-1567-01A 54 years, female, white, dead, 524 days 152.5
TCGA-23-1114-01B 55 years, female, white, dead, 2089 days 150.7
TCGA-13-1405-01A 49 years, female, white, dead, 868 days 149.8
TCGA-13-0900-01B 59 years, female, white, alive, 4077 days 149.8
TCGA-24-1470-01A 54 years, female, white, alive, 105 days 148.9
TCGA-36-1570-01A 49 years, female, white, alive, 655 days 148.1
TCGA-24-1434-01A 59 years, female, white, dead, 568 days 146.7
TCGA-24-1551-01A 53 years, female, white, dead, 1579 days 146.4
TCGA-09-1665-01B 74 years, female, white, dead, 1266 days 145.6
TCGA-09-2051-01A 42 years, female, white, alive, 1919 days 145.5
TCGA-61-1741-01A 76 years, female, white, dead, 1024 days 145.2
TCGA-04-1530-01A 68 years, female, white, dead, 3622 days 145.2
TCGA-25-2042-01A 60 years, female, american indian or alaska native, dead, 396 days 143.5
TCGA-24-1550-01A 49 years, female, white, dead, 1249 days 143.4
TCGA-29-1695-01A 62 years, female, white, dead, 1229 days 142.8
TCGA-31-1946-01A 30 years, female, alive, 918 days 142.2
TCGA-24-2262-01A 57 years, female, white, dead, 11 days 141.0
TCGA-25-1626-01A 65 years, female, white, dead, 518 days 139.3
TCGA-24-2271-01A 55 years, female, asian, dead, 962 days 138.6
TCGA-25-1320-01A 65 years, female, white, dead, 1155 days 138.5
TCGA-24-2027-01A 51 years, female, white, dead, 3337 days 138.4
TCGA-61-2003-01A 53 years, female, white, alive, 122 days 137.8
TCGA-29-1691-01A 51 years, female, white, dead, 1470 days 137.4
TCGA-24-1427-01A 58 years, female, alive, 147 days 137.2
TCGA-25-2399-01A 80 years, female, white, dead, 608 days 136.8
TCGA-25-2398-01A 71 years, female, white, dead, 1369 days 136.1
TCGA-24-1847-01A 45 years, female, white, alive, 343 days 135.2
TCGA-31-1959-01A 49 years, female, white, alive, 67 days 134.8
TCGA-29-1697-01A 62 years, female, white, dead, 949 days 134.0
TCGA-24-1474-01A 57 years, female, black or african american, dead, 676 days 133.7
TCGA-24-1105-01A 36 years, female, white, dead, 1442 days 133.2
TCGA-25-1628-01A 67 years, female, white, dead, 627 days 128.0
TCGA-04-1331-01A 79 years, female, white, dead, 1336 days 126.7
TCGA-25-1623-01A 71 years, female, white, dead, 565 days 126.0
TCGA-04-1362-01A 59 years, female, white, dead, 1348 days 125.9
TCGA-61-2098-01A 62 years, female, white, alive, 1993 days 125.9
TCGA-24-2020-01A 67 years, female, white, dead, 4624 days 120.3
TCGA-57-1582-01A female, white, dead, 731 days 119.9
TCGA-24-1469-01A 71 years, female, white, alive, 277 days 119.0
TCGA-57-1993-01A 56 years, female, white, alive, 763 days 118.9
TCGA-24-1425-01A 45 years, female, white, alive, 181 days 116.5
TCGA-59-2348-01A female, white, alive, 5481 days 116.3
TCGA-25-1318-01A 54 years, female, white, dead, 1064 days 115.4
TCGA-25-1326-01A 61 years, female, white, dead, 1249 days 115.2
TCGA-25-1322-01A 62 years, female, white, dead, 91 days 112.9
TCGA-25-1319-01A 73 years, female, white, dead, 1977 days 111.8
TCGA-13-0908-01B 58 years, female, white, dead, 1843 days 111.5
TCGA-24-2261-01A 76 years, female, white, dead, 24 days 111.0
TCGA-59-2352-01A female, white, dead, 286 days 110.4
TCGA-13-1492-01A 66 years, female, white, dead, 3819 days 110.3
TCGA-09-1668-01B 57 years, female, white, alive, 1684 days 108.2
TCGA-24-1557-01A 49 years, female, white, dead, 1213 days 105.8
TCGA-23-1120-01A 60 years, female, white, alive, 130 days 104.5
TCGA-24-2036-01A 50 years, female, white, dead, 1947 days 103.5
TCGA-31-1950-01A 76 years, female, white, alive, 571 days 102.9
TCGA-61-2102-01A 74 years, female, white, dead, 197 days 101.3
TCGA-25-1329-01A 76 years, female, white, dead, 457 days 100.6
TCGA-31-1951-01A 58 years, female, white, alive, 684 days 100.4
TCGA-61-2012-01A 81 years, female, white, alive, 932 days 97.4
TCGA-24-2297-01A 56 years, female, white, dead, 1699 days 96.6
TCGA-29-A5NZ-01A 66 years, female, black or african american, dead, 1088 days 90.9
TCGA-24-2289-01A 69 years, female, white, dead, 2049 days 80.4
TCGA-61-2088-01A 51 years, female, white, alive, 145 days 78.4
TCGA-57-1994-01A 63 years, female, white, alive, 761 days 77.8
TCGA-13-1511-01A 52 years, female, asian, dead, 1650 days 76.4
TCGA-36-1581-01A 63 years, female, white, alive, 751 days 70.6
TCGA-61-2113-01A 54 years, female, white, dead, 676 days 66.4
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OVARIAN CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more

Antibody HPA051702
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Click images for details

Contact

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The Human Protein Atlas

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.