HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:175.2 nTPM
HPA:175.2 nTPM
GTEx:249.9 nTPM
FANTOM5:80.4 Scaled Tags Per Million
Pig:144.8 nTPM
Mouse:13.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042097Antibody CAB005044Antibody CAB009803
Glial cells MediumHighHigh
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 175.2
Sample id Sample description nTPM
Hippocampus
nTPM: 136.7
1911 Female, age 85, right hemisphere 153.2
2621 Female, age 67, right hemisphere 150.0
2529 Female, age 94, left hemisphere 146.9
1898 Male, age 80, left hemisphere 137.3
1855 Male, age 76, left hemisphere 119.7
2148 Female, age 91, left hemisphere 113.2
Dentate gyrus
nTPM: 139.4
2530 Female, age 94, left hemisphere 230.9
2010 Male, age 76, both hemispheres 144.1
2528 Male, age 74, both hemispheres 129.7
2246 Female, age 85, both hemispheres 121.5
2531 Female, age 67, both hemispheres 114.8
1927 Female, age 91, both hemispheres 95.3
Entorhinal gyrus
nTPM: 147.3
2117 Female, age 91, right hemisphere 217.4
2764 Male, age 80, right hemisphere 184.8
2686 Male, age 75, right hemisphere 130.3
1938 Female, age 85, left hemisphere 127.5
2613 Female, age 94, left hemisphere 117.1
1787 Male, age 76, left hemisphere 106.5
Hippocampus, CA1
nTPM: 109.1
1873 Female, age 85, both hemispheres 127.8
2527 Male, age 74, both hemispheres 126.5
2749 Male, age 80, left hemisphere 110.8
2082 Female, age 91, right hemisphere 107.0
2045 Male, age 76, both hemispheres 73.3
Hippocampus, CA2
nTPM: 131.1
1963 Male, age 80, left hemisphere 165.3
2249 Male, age 74, both hemispheres 147.6
2437 Female, age 94, left hemisphere 141.7
1940 Female, age 85, left hemisphere 129.4
2113 Female, age 91, right hemisphere 114.8
1892 Male, age 76, both hemispheres 87.6
Hippocampus, CA3
nTPM: 106.0
1891 Female, age 85, both hemispheres 165.8
1867 Male, age 76, both hemispheres 124.8
2436 Male, age 74, both hemispheres 97.5
2861 Female, age 67, both hemispheres 86.1
2137 Male, age 80, left hemisphere 83.2
2620 Female, age 94, left hemisphere 78.6
Parahippocampal cortex
nTPM: 119.1
2692 Male, age 74, both hemispheres 176.6
2532 Female, age 72, left hemisphere 167.0
1990 Female, age 91, right hemisphere 133.8
1850 Male, age 80, both hemispheres 124.3
2018 Male, age 76, both hemispheres 115.2
2245 Female, age 91, both hemispheres 114.1
1933 Female, age 85, both hemispheres 108.5
2693 Female, age 94, both hemispheres 87.2
2250 Female, age 67, right hemisphere 85.7
2622 Female, age 67, right hemisphere 78.2
Perirhinal gyrus
nTPM: 86.6
1794 Male, age 80, right hemisphere 98.7
2521 Female, age 94, right hemisphere 89.6
2848 Male, age 76, right hemisphere 87.7
1847 Female, age 91, left hemisphere 80.5
1841 Female, age 85, right hemisphere 76.6
Subiculum
nTPM: 175.2
2042 Male, age 76, both hemispheres 229.0
1901 Male, age 80, both hemispheres 215.2
2438 Female, age 94, left hemisphere 162.7
1977 Female, age 85, both hemispheres 162.3
2619 Male, age 74, both hemispheres 158.8
2729 Female, age 91, right hemisphere 123.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 249.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 249.9
Samples: 197

Max nTPM: 1008.7
Min nTPM: 20.2
Std nTPM: 162.6
Median nTPM: 228.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1008.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 910.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 744.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 730.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 702.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 596.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 580.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 564.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 560.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 539.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 538.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.4
FF:10153-102I9 76 years, female 85.5
FF:10169-103B7 60 years, female 75.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 144.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 144.8
Samples: 4

Max nTPM: 232.5
Min nTPM: 44.7
Sample A Female 232.5
Sample B Female 108.1
Sample C Male 193.7
Sample D Male 44.7
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 69.3
Min nTPM: 29.3
Sample A Female 29.3
Sample B Female 69.3
Sample C Male 33.7
Sample D Male 39.8
Subiculum
nTPM: 49.8
Samples: 4

Max nTPM: 64.4
Min nTPM: 32.3
Sample A Female 53.6
Sample B Female 64.4
Sample C Male 32.3
Sample D Male 48.8
Ventral hippocampus
nTPM: 91.7
Samples: 4

Max nTPM: 111.4
Min nTPM: 50.7
Sample A Female 111.4
Sample B Female 50.7
Sample C Male 100.7
Sample D Male 103.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.9
Samples: 4

Max nTPM: 11.1
Min nTPM: 3.5
Sample A Male 11.1
Sample B Male 8.9
Sample C Female 8.0
Sample D Female 3.5
Hippocampal formation
nTPM: 13.6
Samples: 4

Max nTPM: 17.5
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 12.2
Sample C Female 17.5
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70546384 Antisense, RP_050623_04_C01, Mouse strain C57BL/6J (56 days, male) 0.4

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