We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EEF2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • EEF2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:567.7 nTPM
FANTOM5:667.6 Scaled Tags Per Million
Pig:343.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040534Antibody HPA057351Antibody CAB007795
Glial cells MediumNot detectedLow
Neuronal cells MediumMediumLow







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 567.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 567.7
Samples: 246

Max nTPM: 1016.1
Min nTPM: 268.7
Std nTPM: 125.4
Median nTPM: 558.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1016.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 969.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 927.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 916.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 911.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 905.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 883.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 831.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 826.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 821.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 808.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 795.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 789.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 782.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 767.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 765.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 752.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 750.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 746.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 746.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 743.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 739.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 733.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 726.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 726.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 725.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 716.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 716.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 714.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 709.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 708.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 706.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 702.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 699.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 698.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 693.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 691.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 690.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 688.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 677.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 676.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 672.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 669.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 669.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 669.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 667.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 665.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 664.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 662.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 662.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 659.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 656.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 653.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 651.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 651.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 651.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 649.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 648.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 648.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 644.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 643.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 639.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 637.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 636.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 633.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 632.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 629.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 628.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 626.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 626.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 624.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 623.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 622.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 619.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 616.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 616.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 615.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 615.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 613.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 612.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 608.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 607.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 606.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 606.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 605.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 603.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 602.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 602.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 600.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 598.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 598.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 597.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 596.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 596.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 595.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 595.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 594.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 592.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 592.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 591.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 589.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 589.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 588.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 588.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 586.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 585.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 584.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 583.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 583.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 581.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 580.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 575.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 574.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 574.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 571.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 569.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 566.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 566.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 566.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 564.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 562.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 561.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 558.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 558.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 558.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 557.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 557.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 555.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 554.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 552.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 551.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 548.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 547.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 547.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 542.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 541.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 540.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 536.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 536.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 535.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 533.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 530.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 529.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 528.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 527.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 527.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 526.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 525.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 525.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 524.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 524.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 522.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 519.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 516.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 513.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 512.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 512.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 511.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 511.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 511.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 510.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 508.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 507.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 504.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 503.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 502.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 501.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 498.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 496.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 495.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 494.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 494.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 491.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 489.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 489.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 488.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 488.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 487.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 485.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 485.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 480.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 478.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 477.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 476.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 475.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 475.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 470.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 469.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 466.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 465.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 465.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 464.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 463.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 463.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 463.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 462.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 462.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 461.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 460.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 457.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 456.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 456.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 453.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 452.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 449.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 447.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 447.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 447.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 446.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 446.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 444.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 441.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 441.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 437.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 437.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 433.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 432.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 432.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 427.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 427.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 427.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 427.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 423.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 421.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 418.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 417.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 415.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 414.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 413.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 411.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 407.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 406.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 391.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 391.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 389.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 383.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 382.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 380.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 368.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 359.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 358.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 317.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 316.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 296.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 288.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 268.7
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 667.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 667.6
FF:10164-103B2 76 years, female 667.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 343.1
Pig sample Sample description nTPM
Caudate
nTPM: 343.2
Samples: 4

Max nTPM: 406.9
Min nTPM: 296.0
Sample A Female 296.0
Sample B Female 360.8
Sample C Male 406.9
Sample D Male 308.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.